Pairwise Alignments

Query, 441 a.a., sodium:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., Na+/H+ antiporter NhaC (RefSeq) from Shewanella loihica PV-4

 Score =  574 bits (1480), Expect = e-168
 Identities = 294/441 (66%), Positives = 365/441 (82%), Gaps = 2/441 (0%)

Query: 1   MNPVVISVCVMLLLALMRVNVVVALTFSAVVGGLVAGMSLNETVAAFESGLGGGATIALS 60
           MN VVI+VC+ML L+L RVNVV+ALT SA+V GLV GM+L++TV AF +GLGGGA IALS
Sbjct: 1   MNAVVIAVCLMLGLSLARVNVVIALTVSALVAGLVGGMNLDQTVDAFNTGLGGGAQIALS 60

Query: 61  YAMLGTFAVAISKSGITDLLAQSVIRRIHGQESHAASTGLKYLVLISLLLMAMASQNVIP 120
           YA+LG FAVA+S SG+T L+++ VI ++  +ES      +++ +L+++L MA++SQN++P
Sbjct: 61  YALLGAFAVALSHSGLTTLISRKVIAQLGQEESPGNVNKVRWFLLLAILAMAVSSQNILP 120

Query: 121 VHIAFIPILIPPLLSVFAKLKLDRRLVACVLTFGLITPYMVLPVGFGGIFLNNILLKNLH 180
           +HIAFIPILIPPLL V +KLKLDRRLVACVLTFGL+T YM+LPVGFGGIFLN+ILL NL 
Sbjct: 121 IHIAFIPILIPPLLHVMSKLKLDRRLVACVLTFGLVTTYMILPVGFGGIFLNDILLSNLT 180

Query: 181 ENGLESITASQVPTAMILPAAGMIFGLLLAVLFSYRKPREYQETELTVVQQESSSINKQH 240
            N L+++   Q+P+AM++PA GM+ GL +AV  SYRKPREY+E EL +  +   ++N+++
Sbjct: 181 SNNLDAVR-EQIPSAMLIPALGMVVGLFIAVFISYRKPREYKE-ELILAAEPEETLNRRN 238

Query: 241 IAIAGVGIVAALAVQLLTGSMIIGALAGFMVFTFGGVIAWKETHDVFTRGVHMMAMIGFI 300
           I IA V I + LAVQL TGSMI GAL GF++F+F G +      D+F +GV MMA IGFI
Sbjct: 239 IIIALVAIASTLAVQLYTGSMIFGALIGFIIFSFSGALKHVADQDIFNQGVRMMANIGFI 298

Query: 301 MISAAGFAAVMKATGGVETLVTSLSTSIGDNKALAALLMLVVGLLVTMGIGSSFSTIPII 360
           MISAAGFAAV+KATG V TLV SLS  IGDN+ALAA LMLVVGLL+TMGIGSSFSTIPII
Sbjct: 299 MISAAGFAAVVKATGDVGTLVDSLSHLIGDNRALAAFLMLVVGLLITMGIGSSFSTIPII 358

Query: 361 ATIYVPLCLSFGFSPMATVALVGTAAALGDAGSPASDSTLGPTSGLNADGQHEHIWETVV 420
           ATIYVPL +SFGFS  AT+ALVGTAAALGDAGSPASDSTLGPT+GLNADGQH+HI ++V+
Sbjct: 359 ATIYVPLAISFGFSVPATIALVGTAAALGDAGSPASDSTLGPTAGLNADGQHDHIRDSVI 418

Query: 421 PTFIHYNLPLIVFGWIAAMVL 441
           PTFIHYN+PL++ GWIAAMVL
Sbjct: 419 PTFIHYNIPLLISGWIAAMVL 439