Pairwise Alignments

Query, 441 a.a., sodium:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 439 a.a., membrane protein, putative (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  585 bits (1507), Expect = e-171
 Identities = 304/442 (68%), Positives = 367/442 (83%), Gaps = 4/442 (0%)

Query: 1   MNPVVISVCVMLLLALMRVNVVVALTFSAVVGGLVAGMSLNETVAAFESGLGGGATIALS 60
           MN VVI+VC+ML L+L RVNVVVALT SA+V GLV GM L+ T+ AF +GLGGGA IALS
Sbjct: 1   MNAVVIAVCLMLALSLARVNVVVALTISALVAGLVGGMDLHRTIDAFNTGLGGGAQIALS 60

Query: 61  YAMLGTFAVAISKSGITDLLAQSVIRRIHGQESHAASTG-LKYLVLISLLLMAMASQNVI 119
           YA+LG FAVA+S SG+T L++ S+I+ + G+E +A +T  +++L+L+SLL M+MASQN++
Sbjct: 61  YALLGAFAVALSHSGLTTLISNSIIKSL-GREPNATNTNWVRWLLLLSLLAMSMASQNIL 119

Query: 120 PVHIAFIPILIPPLLSVFAKLKLDRRLVACVLTFGLITPYMVLPVGFGGIFLNNILLKNL 179
           P+HIAFIPIL+PPLL V  KL +DRRLVACVLTFGL+T YM+LPVGFGGIFLN+ILL NL
Sbjct: 120 PIHIAFIPILVPPLLHVMTKLNIDRRLVACVLTFGLVTTYMILPVGFGGIFLNDILLSNL 179

Query: 180 HENGLESITASQVPTAMILPAAGMIFGLLLAVLFSYRKPREYQETELTVVQQESSSINKQ 239
             NGL ++   Q+P AM++PAAGM+ GLL+AV  SYRKPR Y ET++   + E   +NK+
Sbjct: 180 TSNGLVAVR-DQIPPAMLIPAAGMVVGLLIAVFVSYRKPRVYDETKVLSAEPEEK-LNKR 237

Query: 240 HIAIAGVGIVAALAVQLLTGSMIIGALAGFMVFTFGGVIAWKETHDVFTRGVHMMAMIGF 299
           +I IA + I+A L VQL T SMI GAL GFM+F+F G +      D+FT+GV MMA IGF
Sbjct: 238 NIVIAALAILATLFVQLETDSMIFGALVGFMIFSFSGALKHVADQDIFTQGVRMMANIGF 297

Query: 300 IMISAAGFAAVMKATGGVETLVTSLSTSIGDNKALAALLMLVVGLLVTMGIGSSFSTIPI 359
           IMISAAGFAAV+K TG V TLV+SLS+ IGDNKALAA LMLVVGLL+TMGIGSSFSTIPI
Sbjct: 298 IMISAAGFAAVVKETGEVGTLVSSLSSLIGDNKALAAFLMLVVGLLITMGIGSSFSTIPI 357

Query: 360 IATIYVPLCLSFGFSPMATVALVGTAAALGDAGSPASDSTLGPTSGLNADGQHEHIWETV 419
           IATIYVPL LSFGFS  AT+ALVGTAAALGDAGSPASDSTLGPTSGLNADGQH+HI ++V
Sbjct: 358 IATIYVPLALSFGFSVPATIALVGTAAALGDAGSPASDSTLGPTSGLNADGQHDHIRDSV 417

Query: 420 VPTFIHYNLPLIVFGWIAAMVL 441
           +PTFIHYN+PL+VFGWIAAMVL
Sbjct: 418 IPTFIHYNIPLLVFGWIAAMVL 439