Pairwise Alignments

Query, 264 a.a., tRNA pseudouridine(38-40) synthase TruA from Vibrio cholerae E7946 ATCC 55056

Subject, 284 a.a., tRNA pseudouridine synthase A (EC 4.2.1.70) from Pseudomonas fluorescens FW300-N2E2

 Score =  304 bits (779), Expect = 1e-87
 Identities = 150/259 (57%), Positives = 184/259 (71%), Gaps = 1/259 (0%)

Query: 2   RIALGIEYDGTHYYGWQRQRE-VKSVQEALEKALSKIANHPVEVQCAGRTDAGVHGTGQV 60
           RIALG+EY G+ Y GWQRQ   V +VQE LE ALSK+A+ PV + CAGRTDAGVH  GQV
Sbjct: 18  RIALGVEYKGSRYRGWQRQASGVLTVQETLENALSKVADSPVSLHCAGRTDAGVHACGQV 77

Query: 61  VHFDTTAERQMVAWTMGANANLPKDIAVRWAMAVPDEFHARFSATARRYRYVIYNHVYRP 120
           VHFDT  ER M AW MGAN NLP D++V WA  +P  FHARF A ARRYRYVIYN   RP
Sbjct: 78  VHFDTQVERSMKAWVMGANINLPHDVSVSWAKVMPAHFHARFKAIARRYRYVIYNDQIRP 137

Query: 121 GILNSGVSHYHGELDVEKMQQAGQYLLGENDFTSFRAVHCQSRSPWRNVMHLNVTRHGRY 180
             LN  ++  H  LDVE+M +A QYL+G +DF++FRA  CQ++SP + + HL VTRHG+ 
Sbjct: 138 AHLNEEITWNHRPLDVERMAEAAQYLVGVHDFSAFRAGQCQAKSPIKELHHLRVTRHGKM 197

Query: 181 VVIDIKANAFVHHMVRNITGSLIAVGRGEQKPEWIQWLLAQKDRTLAAATAKAEGLYLVS 240
           +V+DI+A+AF+HHMVRNI G L+ +G GE+  EWI+ +L  + R     TA   GLYLV 
Sbjct: 198 IVLDIRASAFLHHMVRNIAGVLMTIGAGERPVEWIKEVLDSRVRRSGGVTAHPFGLYLVQ 257

Query: 241 VDYPAHFGLPEMPIGPLFL 259
           V+Y   F LPE  IGP FL
Sbjct: 258 VEYRDEFELPERYIGPHFL 276