Pairwise Alignments

Query, 264 a.a., tRNA pseudouridine(38-40) synthase TruA from Vibrio cholerae E7946 ATCC 55056

Subject, 286 a.a., pseudouridylate synthase I from Pseudomonas stutzeri RCH2

 Score =  281 bits (718), Expect = 1e-80
 Identities = 142/260 (54%), Positives = 177/260 (68%), Gaps = 2/260 (0%)

Query: 2   RIALGIEYDGTHYYGWQRQRE-VKSVQEALEKALSKIAN-HPVEVQCAGRTDAGVHGTGQ 59
           RIALG+EY G+ Y G+QRQR  V S+QE+LE ALSK+A   PV + CAGRTDA VH +GQ
Sbjct: 19  RIALGVEYKGSRYRGFQRQRAGVPSIQESLETALSKVAGGQPVTLSCAGRTDALVHASGQ 78

Query: 60  VVHFDTTAERQMVAWTMGANANLPKDIAVRWAMAVPDEFHARFSATARRYRYVIYNHVYR 119
           VVHFDTT  R M AW MGAN NLP DI+V WA  +P  F ARFSA ARRYRYVIYN   R
Sbjct: 79  VVHFDTTVARSMHAWIMGANMNLPPDISVTWAKEMPQRFDARFSAMARRYRYVIYNDQIR 138

Query: 120 PGILNSGVSHYHGELDVEKMQQAGQYLLGENDFTSFRAVHCQSRSPWRNVMHLNVTRHGR 179
           P  +   V+  H  LD+E+M+ A    +G +DF++FRA  CQ++SP + + HL +  HGR
Sbjct: 139 PAHMAEEVTWNHRPLDIERMRAAAAAFVGTHDFSAFRARQCQAKSPIKTIHHLELLEHGR 198

Query: 180 YVVIDIKANAFVHHMVRNITGSLIAVGRGEQKPEWIQWLLAQKDRTLAAATAKAEGLYLV 239
            +VID++ANAF+HHMVRN  G L+ +G GE+  EW   +L  + R     TA   GLYLV
Sbjct: 199 LIVIDVRANAFLHHMVRNFAGVLMTIGAGERPVEWAGEVLQSRIRRTGGVTAHPYGLYLV 258

Query: 240 SVDYPAHFGLPEMPIGPLFL 259
            VDYP  F LP+  +GP FL
Sbjct: 259 EVDYPEEFELPKRYLGPHFL 278