Pairwise Alignments

Query, 264 a.a., tRNA pseudouridine(38-40) synthase TruA from Vibrio cholerae E7946 ATCC 55056

Subject, 247 a.a., tRNA pseudouridine synthase A from Sinorhizobium meliloti 1021

 Score =  169 bits (427), Expect = 7e-47
 Identities = 95/245 (38%), Positives = 133/245 (54%), Gaps = 3/245 (1%)

Query: 2   RIALGIEYDGTHYYGWQRQREVKSVQEALEKALSKIANHPVEVQCAGRTDAGVHGTGQVV 61
           R  L +EYDG+ Y GWQRQ    SVQ A+EKA+  +    V ++ AGRTD+GVH  GQV 
Sbjct: 3   RYRLTVEYDGSDYVGWQRQDNGPSVQGAIEKAVLSLTRETVSIRGAGRTDSGVHARGQVA 62

Query: 62  HFDTTAERQMVAWTMGANANLP---KDIAVRWAMAVPDEFHARFSATARRYRYVIYNHVY 118
           H D T E +        NA+L    + +++      P +F ARFSA  R Y Y I +   
Sbjct: 63  HLDLTREWKSYTLQNALNAHLALAGERVSILDVAEAPGDFDARFSAIRRHYLYRIISRRS 122

Query: 119 RPGILNSGVSHYHGELDVEKMQQAGQYLLGENDFTSFRAVHCQSRSPWRNVMHLNVTRHG 178
              +           LD + M +A Q L+G +DFT+FR+ HCQ+ SP R +  L+VTR G
Sbjct: 123 PLALEARRAWWVPKPLDHDAMHEAAQRLVGHHDFTTFRSAHCQATSPLRTLDRLDVTRAG 182

Query: 179 RYVVIDIKANAFVHHMVRNITGSLIAVGRGEQKPEWIQWLLAQKDRTLAAATAKAEGLYL 238
             + I   A +F+H+ +R+  GSL  VG G+  P+ +Q  L  +DR      A  +GLY 
Sbjct: 183 ELIEIRATAQSFLHNQIRSFAGSLKLVGEGKWTPDDLQAALEARDRKACGPVAPPDGLYF 242

Query: 239 VSVDY 243
           + VDY
Sbjct: 243 MRVDY 247