Pairwise Alignments

Query, 264 a.a., tRNA pseudouridine(38-40) synthase TruA from Vibrio cholerae E7946 ATCC 55056

Subject, 261 a.a., tRNA pseudouridine synthase A (RefSeq) from Shewanella amazonensis SB2B

 Score =  382 bits (980), Expect = e-111
 Identities = 179/261 (68%), Positives = 213/261 (81%)

Query: 1   MRIALGIEYDGTHYYGWQRQREVKSVQEALEKALSKIANHPVEVQCAGRTDAGVHGTGQV 60
           MRIALGIEYDG+ +YGWQRQ EV SVQ  LE+ALS +AN P+EVQCAGRTDAGVH TGQV
Sbjct: 1   MRIALGIEYDGSKFYGWQRQAEVNSVQAELERALSIVANEPIEVQCAGRTDAGVHATGQV 60

Query: 61  VHFDTTAERQMVAWTMGANANLPKDIAVRWAMAVPDEFHARFSATARRYRYVIYNHVYRP 120
           VHFDT A R+  AWT+G N +LP DIAVRWAM V D+FHARFSATARRYRYVI+NH +RP
Sbjct: 61  VHFDTNAVRKEGAWTLGVNVHLPDDIAVRWAMPVNDDFHARFSATARRYRYVIFNHNFRP 120

Query: 121 GILNSGVSHYHGELDVEKMQQAGQYLLGENDFTSFRAVHCQSRSPWRNVMHLNVTRHGRY 180
           GIL  GVSHYHG++DVE+M  A Q L+GE DFTSFRA+ CQS +P+RNV  ++V+RHG Y
Sbjct: 121 GILRKGVSHYHGDIDVERMHDAAQALIGERDFTSFRAIGCQSNTPFRNVHKVSVSRHGMY 180

Query: 181 VVIDIKANAFVHHMVRNITGSLIAVGRGEQKPEWIQWLLAQKDRTLAAATAKAEGLYLVS 240
           +V+DI+ANAF+HHMVRNI GSL+ +G G Q  +W+  LL  KDR+ AAATAK  GLYLV 
Sbjct: 181 IVVDIQANAFLHHMVRNIVGSLLEIGLGNQPLDWMATLLEAKDRSQAAATAKPHGLYLVD 240

Query: 241 VDYPAHFGLPEMPIGPLFLPD 261
           V YP  FGLP++ +GPLF+PD
Sbjct: 241 VTYPESFGLPKLSLGPLFMPD 261