Pairwise Alignments

Query, 264 a.a., tRNA pseudouridine(38-40) synthase TruA from Vibrio cholerae E7946 ATCC 55056

Subject, 276 a.a., tRNA pseudouridine(38-40) synthase TruA from Rahnella sp. WP5

 Score =  377 bits (967), Expect = e-109
 Identities = 184/260 (70%), Positives = 209/260 (80%)

Query: 2   RIALGIEYDGTHYYGWQRQREVKSVQEALEKALSKIANHPVEVQCAGRTDAGVHGTGQVV 61
           R+ALGIEYDG+ Y+GWQRQ+ V SVQE LEKALS++AN P+ V CAGRTDAGV  TGQVV
Sbjct: 17  RVALGIEYDGSAYFGWQRQQGVASVQECLEKALSRVANAPIVVFCAGRTDAGVSATGQVV 76

Query: 62  HFDTTAERQMVAWTMGANANLPKDIAVRWAMAVPDEFHARFSATARRYRYVIYNHVYRPG 121
           HFDT   R+  AWTMG N +LPKDIAVRW   V ++FHARFSATARRYRYVIYN+ YR  
Sbjct: 77  HFDTPVLRKDAAWTMGVNTHLPKDIAVRWCANVGEDFHARFSATARRYRYVIYNNRYRSA 136

Query: 122 ILNSGVSHYHGELDVEKMQQAGQYLLGENDFTSFRAVHCQSRSPWRNVMHLNVTRHGRYV 181
           IL++GV+H H  LDVEKMQ AGQ LLGENDFTSFRA  CQSR+PWR VMH+NV+RHG YV
Sbjct: 137 ILHAGVTHVHMPLDVEKMQLAGQALLGENDFTSFRASQCQSRTPWRYVMHVNVSRHGSYV 196

Query: 182 VIDIKANAFVHHMVRNITGSLIAVGRGEQKPEWIQWLLAQKDRTLAAATAKAEGLYLVSV 241
           V+DIKANAFVHHMVRNI GSL+ +G G Q   W+  LLA KDR LAAAT K EGLYLV V
Sbjct: 197 VVDIKANAFVHHMVRNIVGSLVEIGAGNQPVGWMGELLAAKDRNLAAATGKPEGLYLVCV 256

Query: 242 DYPAHFGLPEMPIGPLFLPD 261
           DYP  F LP++ +GPLFL D
Sbjct: 257 DYPEKFALPQVNMGPLFLED 276