Pairwise Alignments

Query, 264 a.a., tRNA pseudouridine(38-40) synthase TruA from Vibrio cholerae E7946 ATCC 55056

Subject, 245 a.a., tRNA pseudouridine(38-40) synthase TruA from Rhodopseudomonas palustris CGA009

 Score =  160 bits (406), Expect = 2e-44
 Identities = 100/243 (41%), Positives = 128/243 (52%), Gaps = 1/243 (0%)

Query: 2   RIALGIEYDGTHYYGWQRQREVKSVQEALEKALSKIANHPVEVQCAGRTDAGVHGTGQVV 61
           R  L IEYDG  + GWQ Q  + SVQ ALE A        V V  AGRTDAGVH  GQV 
Sbjct: 3   RYKLTIEYDGAPFCGWQLQPALPSVQGALEAAALATCGEAVRVHGAGRTDAGVHALGQVA 62

Query: 62  HFDTTAERQMVAWTMGANANL-PKDIAVRWAMAVPDEFHARFSATARRYRYVIYNHVYRP 120
           H D     +        NA+L P  +AV  A  VPD F ARFSA  R YRY I N     
Sbjct: 63  HVDIPKPFRADKLRDALNAHLRPNPVAVLAAEIVPDTFEARFSAVRRHYRYRIANRRSNL 122

Query: 121 GILNSGVSHYHGELDVEKMQQAGQYLLGENDFTSFRAVHCQSRSPWRNVMHLNVTRHGRY 180
            +    V      LD + M +A Q L+G+++FT+FR   CQ+ SP + +  L+V R G  
Sbjct: 123 ALDLGKVWRVPKPLDTDAMHRAAQVLIGKHNFTTFRDTECQAASPEKTLDVLDVIRDGDA 182

Query: 181 VVIDIKANAFVHHMVRNITGSLIAVGRGEQKPEWIQWLLAQKDRTLAAATAKAEGLYLVS 240
           V I   A +++H  VR++ GSL+ VG G    + +   LA + R+     A  EGLYL+ 
Sbjct: 183 VDIITNARSYLHSQVRSMVGSLVWVGEGRWTADDLAAALAARRRSACGPVAPPEGLYLMQ 242

Query: 241 VDY 243
           VDY
Sbjct: 243 VDY 245