Pairwise Alignments

Query, 264 a.a., tRNA pseudouridine(38-40) synthase TruA from Vibrio cholerae E7946 ATCC 55056

Subject, 254 a.a., tRNA pseudouridine(38-40) synthase TruA from Parabacteroides merdae CL09T00C40

 Score =  134 bits (337), Expect = 2e-36
 Identities = 89/252 (35%), Positives = 127/252 (50%), Gaps = 19/252 (7%)

Query: 2   RIALGIEYDGTHYYGWQRQREVKSVQEALEKALSKIANHPVEVQCAGRTDAGVHGTGQVV 61
           R  + + Y+G  + GWQ Q    +VQ+++E+AL+ +   PV +  AGRTDAGVH    V 
Sbjct: 3   RYFIYLGYNGKKFCGWQIQPNGITVQQSIEEALATLLRQPVPIVGAGRTDAGVHARLMVA 62

Query: 62  HFDTTAERQMVAWTMGA-NANLPKDIAVRWAMAVPDEFHARFSATARRYRYVI------- 113
           HFD       +A+     N  LPKDIAV   + V  + HARF A +R Y+Y +       
Sbjct: 63  HFDWQEPIADLAFLAEKLNRLLPKDIAVYRIVPVRPDAHARFDAISRTYKYYVTTRKDPF 122

Query: 114 -YNHVYRPGILNSGVSHYHGELDVEKMQQAGQYLLGENDFTSFRAVHCQSRSPWRNVMHL 172
            Y  VY+            G+LD E M +A   L    DFTSF  +H   ++    +   
Sbjct: 123 NYELVYK----------IPGKLDFEAMNKACSVLFDYIDFTSFSKLHTDVKTNNCRIYKA 172

Query: 173 NVTRHGRYVVIDIKANAFVHHMVRNITGSLIAVGRGEQKPEWIQWLLAQKDRTLAAATAK 232
              R G   V  I+A+ F+ +MVR I G+L+ VGRG+   +  + ++  KDR  A  +A 
Sbjct: 173 GWEREGDVWVFTIQADRFLRNMVRAIVGTLLEVGRGKLTVDGFRQVIEAKDRGRAGTSAP 232

Query: 233 AEGLYLVSVDYP 244
              LYLV V YP
Sbjct: 233 GHALYLVDVTYP 244