Pairwise Alignments

Query, 264 a.a., tRNA pseudouridine(38-40) synthase TruA from Vibrio cholerae E7946 ATCC 55056

Subject, 257 a.a., tRNA pseudouridine synthase A from Phaeobacter inhibens DSM 17395

 Score =  156 bits (395), Expect = 4e-43
 Identities = 91/249 (36%), Positives = 135/249 (54%), Gaps = 7/249 (2%)

Query: 2   RIALGIEYDGTHYYGWQRQREVKSVQEALEKALSKIANHPVEVQCAGRTDAGVHGTGQVV 61
           R AL +EY G  + GWQRQ++  SVQ A+E AL+++   P  +  AGRTD GVHG GQV 
Sbjct: 3   RFALKVEYHGAPFAGWQRQKDQPSVQGAIEDALARLEPGPHTIAAAGRTDTGVHGLGQVA 62

Query: 62  HFDTTAERQMVAWTMGANANL-PKDIAVRWAMAVPDEFHARFSATARRYRYVIYNHVYRP 120
           H D   +      +   N +L P  +A+       D++HARFSA  R+Y + I      P
Sbjct: 63  HCDMVKDWDPFRLSEALNFHLKPAPVAIVDCARAEDDWHARFSAVERQYLFRILIR-RAP 121

Query: 121 GILNSG-VSHYHGELDVEKMQQAGQYLLGENDFTSFRAVHCQSRSPWRNVMHLNVTR--- 176
              ++G V   + +LD   MQ+A  +L+G++DFT+FR+  CQ+ SP + +  L + R   
Sbjct: 122 ATHDAGQVWQLNHDLDAGSMQEAANHLIGQHDFTTFRSSICQAASPLKTLDELRIERVQG 181

Query: 177 -HGRYVVIDIKANAFVHHMVRNITGSLIAVGRGEQKPEWIQWLLAQKDRTLAAATAKAEG 235
             G  +   ++A +F+H+ VR+  G+L  VG G   PE ++  L  +DR          G
Sbjct: 182 FSGPEIHFHVRARSFLHNQVRSFVGTLERVGAGAWSPEDVKSALEAEDRAACGPVCPGHG 241

Query: 236 LYLVSVDYP 244
           LYL  V YP
Sbjct: 242 LYLARVGYP 250