Pairwise Alignments

Query, 264 a.a., tRNA pseudouridine(38-40) synthase TruA from Vibrio cholerae E7946 ATCC 55056

Subject, 261 a.a., tRNA pseudouridine synthase A (RefSeq) from Shewanella loihica PV-4

 Score =  374 bits (961), Expect = e-109
 Identities = 177/261 (67%), Positives = 208/261 (79%)

Query: 1   MRIALGIEYDGTHYYGWQRQREVKSVQEALEKALSKIANHPVEVQCAGRTDAGVHGTGQV 60
           MR+ALGIEYDG+ Y+GWQRQ EV SVQ  LE+ALS +AN P+ +QCAGRTDAGVH TGQV
Sbjct: 1   MRVALGIEYDGSRYFGWQRQAEVDSVQAQLERALSFVANEPISIQCAGRTDAGVHATGQV 60

Query: 61  VHFDTTAERQMVAWTMGANANLPKDIAVRWAMAVPDEFHARFSATARRYRYVIYNHVYRP 120
           VHF+T A R+  AWT+G N NLP DIAVRWA  V DEFHARF+ATARRYRY+IYNH +RP
Sbjct: 61  VHFETNAVRKESAWTLGVNVNLPDDIAVRWAKDVDDEFHARFTATARRYRYMIYNHQFRP 120

Query: 121 GILNSGVSHYHGELDVEKMQQAGQYLLGENDFTSFRAVHCQSRSPWRNVMHLNVTRHGRY 180
           GIL SGVSHY G++D  KM +A Q+LLGE DFTSFRA+ CQS +P+R V  +NVTR G Y
Sbjct: 121 GILRSGVSHYPGQIDEAKMHEAAQFLLGEQDFTSFRAIQCQSNTPFRCVHEVNVTRQGMY 180

Query: 181 VVIDIKANAFVHHMVRNITGSLIAVGRGEQKPEWIQWLLAQKDRTLAAATAKAEGLYLVS 240
           + +DIKANAF+HHMVRNI GSL+ VG G Q   WI+ LLA KDRT AAATAK  GLYLV 
Sbjct: 181 ICVDIKANAFLHHMVRNIVGSLLEVGYGRQPVSWIKELLALKDRTQAAATAKPNGLYLVD 240

Query: 241 VDYPAHFGLPEMPIGPLFLPD 261
           V YP H+ LP++ +GPLF+ D
Sbjct: 241 VTYPEHYALPKLALGPLFMLD 261