Pairwise Alignments

Query, 264 a.a., tRNA pseudouridine(38-40) synthase TruA from Vibrio cholerae E7946 ATCC 55056

Subject, 256 a.a., Probable tRNA pseudouridine synthase a TruA (pseudouridylate synthase I) (pseudouridine synthase I) (uracil hydrolyase) from Mycobacterium tuberculosis H37Rv

 Score =  115 bits (289), Expect = 7e-31
 Identities = 78/236 (33%), Positives = 117/236 (49%), Gaps = 16/236 (6%)

Query: 24  KSVQEALEKALSKIANHPVEVQCAGRTDAGVHGTGQVVHFDTTAERQMVAWTMGANAN-- 81
           ++V   L+ AL+ I   PV ++ AGRTDAGVH +GQV H D  A+    A+    +    
Sbjct: 4   RTVAGDLDAALTTIFRTPVRLRAAGRTDAGVHASGQVAHVDVPADALPNAYPRAGHVGDP 63

Query: 82  ------------LPKDIAVRWAMAVPDEFHARFSATARRYRYVIYNHVYRPGILNSG-VS 128
                       LP D+ +      P  F ARFSA  R Y Y +    Y      +  ++
Sbjct: 64  EFLPLLRRLGRFLPADVRILDITRAPAGFDARFSALRRHYVYRLSTAPYGVEPQQARYIT 123

Query: 129 HYHGELDVEKMQQAGQYLLGENDFTSFRAVHCQSRSPWRNVMHLNVTRHGRYVVIDIKAN 188
            +  ELD++ M  A + L+G +DF +F   H +  +  R++  L+ +R G  V   + A+
Sbjct: 124 AWPRELDLDAMTAASRDLMGLHDFAAF-CRHREGATTIRDLQRLDWSRAGTLVTAHVTAD 182

Query: 189 AFVHHMVRNITGSLIAVGRGEQKPEWIQWLLAQKDRTLAAATAKAEGLYLVSVDYP 244
           AF   MVR++ G+L+AVG   +   W + LL    R+   A A A GL L+ VDYP
Sbjct: 183 AFCWSMVRSLVGALLAVGEHRRATTWCRELLTATGRSSDFAVAPAHGLTLIQVDYP 238