Pairwise Alignments

Query, 264 a.a., tRNA pseudouridine(38-40) synthase TruA from Vibrio cholerae E7946 ATCC 55056

Subject, 262 a.a., tRNA pseudouridine(38-40) synthase TruA from Methanococcus maripaludis JJ

 Score = 46.6 bits (109), Expect = 5e-10
 Identities = 32/109 (29%), Positives = 57/109 (52%), Gaps = 2/109 (1%)

Query: 135 DVEKMQQAGQYLLGENDFTSF-RAVHCQSRSPWRNVMHLNVTRHGRYVVIDIKANAFVHH 193
           DVE M++A + L+G + F +  +    + + P R +  + ++ +  ++ IDI   +F+ +
Sbjct: 113 DVELMKKASEKLIGTHYFQNLSKRDKTKVKDPVRTLYDIKISSNDYFITIDIFGESFLWN 172

Query: 194 MVRNITGSLIAVGRGE-QKPEWIQWLLAQKDRTLAAATAKAEGLYLVSV 241
           MVR I   L  VG+ + + PE    L+  +D       + AEGL LV V
Sbjct: 173 MVRRIIRLLSDVGKHKFENPEKFIELILSEDYKKGYPPSPAEGLILVDV 221