Pairwise Alignments

Query, 264 a.a., tRNA pseudouridine(38-40) synthase TruA from Vibrio cholerae E7946 ATCC 55056

Subject, 246 a.a., tRNA pseudouridine(38-40) synthase from Sphingomonas koreensis DSMZ 15582

 Score =  162 bits (409), Expect = 8e-45
 Identities = 98/245 (40%), Positives = 127/245 (51%), Gaps = 3/245 (1%)

Query: 2   RIALGIEYDGTHYYGWQRQREVKSVQEALEKALSKIANHPVEVQCAGRTDAGVHGTGQVV 61
           R AL IEYDG  + GWQ Q    SVQ+A+E AL  I      V  AGRTDAGVH  G   
Sbjct: 3   RFALTIEYDGRPFMGWQYQDHGPSVQQAIEDALHGITGEDALVHAAGRTDAGVHALGMRA 62

Query: 62  HFDTTAERQMVAWTMGANANLPK-DIAVRWAMAVPDEFHARFSATARRYRYVIYNHVYRP 120
           H +   +          NA+L    +A+     V D++HARFS  AR Y Y I N    P
Sbjct: 63  HTEIEKDIAPFRLMEALNAHLRNVPVAILACETVADDWHARFSCIARHYVYRIVNR-RAP 121

Query: 121 GILNSGVS-HYHGELDVEKMQQAGQYLLGENDFTSFRAVHCQSRSPWRNVMHLNVTRHGR 179
              + G+      ELD   M  A Q L+G +DFT+FR+ HCQS S  + +  L+V R G 
Sbjct: 122 LTFDKGLKWRVPAELDAAAMHDAAQTLVGLHDFTTFRSAHCQSASALKTLDRLDVVREGD 181

Query: 180 YVVIDIKANAFVHHMVRNITGSLIAVGRGEQKPEWIQWLLAQKDRTLAAATAKAEGLYLV 239
            + +   A +F+HH VR++ G L  VGRG+     ++  LA KDR      A  +GLY V
Sbjct: 182 EISVYASARSFLHHQVRSMVGCLSMVGRGQWSAADLRDALAAKDRAALGLNAPPDGLYFV 241

Query: 240 SVDYP 244
             DYP
Sbjct: 242 RADYP 246