Pairwise Alignments

Query, 264 a.a., tRNA pseudouridine(38-40) synthase TruA from Vibrio cholerae E7946 ATCC 55056

Subject, 247 a.a., tRNA pseudouridine synthase A from Caulobacter crescentus NA1000

 Score =  172 bits (437), Expect = 5e-48
 Identities = 97/243 (39%), Positives = 136/243 (55%), Gaps = 1/243 (0%)

Query: 2   RIALGIEYDGTHYYGWQRQREVKSVQEALEKALSKIANHPVEVQCAGRTDAGVHGTGQVV 61
           R  L +EYDG  Y G+Q Q  + SVQ A+E A+       V +  AGRTD GVH TGQVV
Sbjct: 3   RYRLLVEYDGRPYAGFQAQATLPSVQGAIEAAVKAFCGQEVRIAAAGRTDTGVHATGQVV 62

Query: 62  HFDTTAERQMVAWTMGANANLPKD-IAVRWAMAVPDEFHARFSATARRYRYVIYNHVYRP 120
           H D   +          NA+L ++ +++  A    + +HARFSA  RRY Y I N    P
Sbjct: 63  HVDLDKDWPAQTVFNALNAHLTREAVSILSAEVAEEGWHARFSANERRYLYRILNRRAPP 122

Query: 121 GILNSGVSHYHGELDVEKMQQAGQYLLGENDFTSFRAVHCQSRSPWRNVMHLNVTRHGRY 180
            +    V H   +LD E M  A Q+L+G +DFT+FR +HCQS+SP + +    V R G  
Sbjct: 123 ALDKGRVWHMKKDLDHEAMHAAAQHLIGLHDFTTFRDMHCQSKSPVKTLDVARVRRVGEE 182

Query: 181 VVIDIKANAFVHHMVRNITGSLIAVGRGEQKPEWIQWLLAQKDRTLAAATAKAEGLYLVS 240
           + +D +A +F+H  VR++TG+L+ VG G    + ++  L  +DR      A A+GLYLV 
Sbjct: 183 IHLDFEARSFLHRQVRSMTGTLVEVGAGRWTVDDVKAALEARDRRECGPVAPADGLYLVG 242

Query: 241 VDY 243
           V Y
Sbjct: 243 VGY 245