Pairwise Alignments

Query, 264 a.a., tRNA pseudouridine(38-40) synthase TruA from Vibrio cholerae E7946 ATCC 55056

Subject, 261 a.a., tRNA pseudouridine synthase A (RefSeq) from Shewanella sp. ANA-3

 Score =  363 bits (933), Expect = e-105
 Identities = 175/261 (67%), Positives = 204/261 (78%)

Query: 1   MRIALGIEYDGTHYYGWQRQREVKSVQEALEKALSKIANHPVEVQCAGRTDAGVHGTGQV 60
           MRIALGIEYDG+ Y+GWQRQ EV SVQ  LE+ALSK+AN P+ + CAGRTDAGVH TGQV
Sbjct: 1   MRIALGIEYDGSGYFGWQRQAEVDSVQGQLEQALSKVANEPISLFCAGRTDAGVHATGQV 60

Query: 61  VHFDTTAERQMVAWTMGANANLPKDIAVRWAMAVPDEFHARFSATARRYRYVIYNHVYRP 120
           VHF+T A R   AWT+G NANLP +IAVRWA  V D FHARFSATARRYRYVIYNH +RP
Sbjct: 61  VHFETNAIRNEGAWTLGVNANLPDNIAVRWAKEVDDTFHARFSATARRYRYVIYNHNFRP 120

Query: 121 GILNSGVSHYHGELDVEKMQQAGQYLLGENDFTSFRAVHCQSRSPWRNVMHLNVTRHGRY 180
           GIL  GVSHYHG++D +KM  A Q LLGE DFTSFRA+ CQS++P+RNV  + VTR G Y
Sbjct: 121 GILRHGVSHYHGDIDTDKMHVAAQALLGEQDFTSFRAIQCQSKTPFRNVHSVKVTRQGMY 180

Query: 181 VVIDIKANAFVHHMVRNITGSLIAVGRGEQKPEWIQWLLAQKDRTLAAATAKAEGLYLVS 240
           V++DI ANAF+HHMVRNI GSL+ +G G Q   W+  LLA KDR  AAATAK  GLYLV 
Sbjct: 181 VIVDISANAFLHHMVRNIVGSLLEIGLGNQPLTWMADLLALKDRNQAAATAKPNGLYLVD 240

Query: 241 VDYPAHFGLPEMPIGPLFLPD 261
           V YP  + LP++ +GPLF+ D
Sbjct: 241 VTYPEQYQLPKLALGPLFMLD 261