Pairwise Alignments
Query, 1621 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056
Subject, 910 a.a., FimV N-terminal domain from Pseudomonas stutzeri RCH2
Score = 67.4 bits (163), Expect = 7e-15
Identities = 76/254 (29%), Positives = 112/254 (44%), Gaps = 27/254 (10%)
Query: 44 VSAESIRLVGPDGQVQPTPQYSENI----VRNSANNEPGRFFGPTSANQTLWSIASQLRP 99
+SA + R V P +P P S V +A + G + TSA TLW IA + R
Sbjct: 148 ISAPAPRAVEP---ARPAPVRSAAASPASVATAAPTQDGSQY-KTSARDTLWDIAERNRR 203
Query: 100 SSSVTVQQTLLAIYQLNPQAFENQNIHTLIPGSTLRVPSLAQISRNSTQDAVNIMASHQA 159
S TV QT+LAI LNP AF + NI+ + G LR+P QIS+ S +A+ +A A
Sbjct: 204 SG--TVHQTMLAIQDLNPDAFIDGNINRMKSGQVLRLPDAQQISKRSQGEAIAQVAEQNA 261
Query: 160 KLNQTPDTPVRPVAPPRPAPVATPKVEAVAQTPPQVTPTTAPQEKAPTELKTPAKPSQST 219
Q + VA R AT + EA T A T + S
Sbjct: 262 AWRQGRNA---AVAGSRQLD-ATRRTEAGDAPSRSDTGDNLRLVAADAGKSTAGSDTGSG 317
Query: 220 DAEVMALEEKNHTLRLMLSQVQSEVSTLKEELGDENRIRSEVERLLEEERRKAEEASRL- 278
D+ AL +K + L + E LK+ L D ++ ++E+L + K ++ ++L
Sbjct: 318 DSG-KALRDKLAVTQESLDSSRRENDELKDRLND---LQGQLEKLQRLMQLKDDQLAKLQ 373
Query: 279 --------APSALD 284
AP+A+D
Sbjct: 374 VQLGAEGQAPAAID 387
Score = 66.6 bits (161), Expect = 1e-14
Identities = 122/582 (20%), Positives = 238/582 (40%), Gaps = 51/582 (8%)
Query: 1055 ELDELDLPEYTEEDALADSQLEPAAESEVEPELELVSEPVTEEAFTELDELDLPEYTEED 1114
+L++L ++D LA Q++ AE + ++ + ++ D+ +
Sbjct: 354 QLEKLQRLMQLKDDQLAKLQVQLGAEGQAPAAIDTAGQ---QQPSVAADDARSAQDRASG 410
Query: 1115 ALADAQLEPAVESEVEPELELASEPAEEEASTELNELDLPEYTEEDALADAQLEPAAESE 1174
AD++++ ++ EP A P E A+ + P A A +EP +
Sbjct: 411 TGADSEVDSTPTNQQEPAPVAAPAPVERPAAAK------PAPKPAPAKPVAPVEPEPKGL 464
Query: 1175 VESELELASDLEEEEPFTELNEL-DLPEYTEEDALADAQLEPAVES-EVEPELELATEPA 1232
++ L L L L L + +A+ +A+L+ ++ + + +L + T PA
Sbjct: 465 IDDLLSNTLLLGAVGGGALLLLLVGLMALSRRNAMKEAELQESLMAVDTVDDLRVGT-PA 523
Query: 1233 EEEAFPELDELDLPEYTEEDALADAQLEPAAEAEVEPELELASDLEEKETFTELDELDLP 1292
+ E E P T A + +A E ++ +A F + EL
Sbjct: 524 FVDIGQEQPE-PAPFQTSSAAAPEELAGTTGDALAEADIYIAYG-----RFNQAAELLQN 577
Query: 1293 EYTEEDALADAQLEPAAESEVEPEL--------ELASVLEEEDSFTELDELDLPEYTEKD 1344
+E +D +L+ EV EL + A + E + E+++L +Y
Sbjct: 578 ALNDEPQRSDLRLKLM---EVYAELGNREGFARQEAELREIGGAAMEVEQLK-HKYPAMV 633
Query: 1345 ALADAQLEPAAESEVEPELGDETETLAQETESDALVADEDLLASVESAVDEVQPELLGAT 1404
+A A A ++++ + D + Q + L A +DL + + ++D++ +L
Sbjct: 634 TVAGASAAAVAATQLDVDSFDLDDL--QLDDPAPLAAGQDLDDAFDLSLDDLDIDLSDKA 691
Query: 1405 QDVPPTQSLANKAFDEEALHDWLS--DNPDGEKPFSFDRPLDAKTIDSA-------GMDI 1455
Q P N FD+ +L + + D FSFD +A D+ D+
Sbjct: 692 QSAAPVDQPFN--FDDLSLDEPEAGRDVQPAASDFSFDLEEEASVPDAKRDDFSDFSFDL 749
Query: 1456 DAMLQMGGEDWNGFHLTPDQQAQLPDDVPEDEQAIWASETPEPQAK---PENWGSQEDLL 1512
D+ D F L+ D+++ + E+++ + P + P+ + D
Sbjct: 750 DSEKNTAATDTE-FSLSLDEESPVAPAAMENDELDFELAEPTGTSNDELPDGFDISLDEP 808
Query: 1513 DFDPQRDGYMTIDELMAQVESEEQGLNPDEEELKLDVGLDEFPDVIGDIRDIDVDSGAEA 1572
+F+ Q +G+ E +++VE++ L+ D +E D D D+ E
Sbjct: 809 EFEAQPNGFA---EQLSEVEADLDNLSRDLQEPASATAGSSADGASDDDFDFFSDTD-ET 864
Query: 1573 AGKLDLAKIYIEMNDEKGAIKLLEEAIVDGDDEIRQQAKRLI 1614
KLDLA+ YI+M D +GA +L+E I +G D +Q+A+ ++
Sbjct: 865 TTKLDLARAYIDMGDAEGARDILDEVISEGSDAQQQEARDML 906
Score = 46.6 bits (109), Expect = 1e-08
Identities = 67/267 (25%), Positives = 105/267 (39%), Gaps = 27/267 (10%)
Query: 354 LDDDLFSTTDDKEENDAEKAFSDEDDVFADLNETDLDFNLDGQDSDDLFVGIDDDGDLDT 413
LD D F D + ++ A A + D DL+ DLD +L D +D + D
Sbjct: 648 LDVDSFDLDDLQLDDPAPLAAGQDLDDAFDLSLDDLDIDLS--DKAQSAAPVDQPFNFDD 705
Query: 414 EFDALNESANGISVNADDKALGLEEMERALNDVSEPTDNDDLNSFDLADENQMSEDDIEA 473
E+ + A D + LEE E ++ D +D SFDL E + D E
Sbjct: 706 LSLDEPEAGRDVQPAASDFSFDLEE-EASVPDAKRDDFSDF--SFDLDSEKNTAATDTEF 762
Query: 474 LLSGDEENEL----LSDGKVDQSLLDDLLASELDALDDEPAIQDTETLDTLLNDELASLS 529
LS DEE+ + + + ++D L + S + D D + N LS
Sbjct: 763 SLSLDEESPVAPAAMENDELDFELAEPTGTSNDELPDGFDISLDEPEFEAQPNGFAEQLS 822
Query: 530 EEDDDEFDLS-----------GAGVAGDQDLD-DLFASIEEQADLEQLEAKAID------ 571
E + D +LS G+ G D D D F+ +E L ID
Sbjct: 823 EVEADLDNLSRDLQEPASATAGSSADGASDDDFDFFSDTDETTTKLDLARAYIDMGDAEG 882
Query: 572 ETALLDEILAEQDAPLSEESTELLDEL 598
+LDE+++E +E+ ++L +L
Sbjct: 883 ARDILDEVISEGSDAQQQEARDMLAKL 909