Pairwise Alignments
Query, 1621 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056
Subject, 948 a.a., conserved hypothetical protein from Pseudomonas syringae pv. syringae B728a
Score = 76.3 bits (186), Expect = 2e-17
Identities = 120/487 (24%), Positives = 202/487 (41%), Gaps = 56/487 (11%)
Query: 1161 ALADAQLEPAAESEVESELELASDLEEEEPFTELNELDLPEYTEEDALADAQL------- 1213
A A+A+ + E + SD++ P + LD+P A A
Sbjct: 487 AKAEAEKHKRMARALAEESDFVSDMDMNAPPASFDGLDVPPPNVRMGGAAAAAAGRERPA 546
Query: 1214 EPAVESEVE-------PELELATEPAEEEAFPELDELDLP------EYTEEDALADAQLE 1260
+P V++E+ +EL E E+ P+ D++ L E A A + +
Sbjct: 547 DPLVQAEIHIAYGRMNQAIELLEEAVNED--PKRDDIRLKLMEIYAEQGNNKAYAAHERK 604
Query: 1261 PAAEAEVEPELELASDLEEKETFTELDELDLPEYTEEDALADAQLEPAAESEVEPELELA 1320
A ++E E+E +L T + + P +E + A A AA + A
Sbjct: 605 LVAAGKLEAEVEQREELNS--TLKPVAPVAAPLASEASSAAPAVAAAAAAATT------A 656
Query: 1321 SVLEEEDSFTELDELDLPEYTEKDALADAQLEPAAESEV----EPELGDETETLAQETES 1376
+++ E D+ L+EL + E+DA + + EP E E+ EPE LA E
Sbjct: 657 ALVAELDA-KYLEELLADDAAEQDAEPEPEPEPEPEPEIVATPEPEPA-VVAPLAAEPVE 714
Query: 1377 DALVADEDLLASVESAVDEVQPEL--LGATQDVPPTQSLANKAFDEEALHDWLSDNPDGE 1434
+A D D S++ + PE+ + D+ + + D+EAL + S E
Sbjct: 715 EADPFDNDFDLSLDEFEEPSVPEVSTVNDIDDLMLDEPKVSAVADDEAL-SFESVMQQQE 773
Query: 1435 KPFSFDRPLDAKTIDSAGMDIDAMLQMGGEDWNGFHLTPDQQAQLPDDVPEDEQAIWASE 1494
+ + P D D + D L+ + G + P D+ E S+
Sbjct: 774 EARAATTPQDLADFDLDLSEEDPALKSEDDFLLGL-------GEDPLDLGETSPVPPVSD 826
Query: 1495 TPEPQAKPENWG-SQEDLLDFDPQRDGYMT-IDELMAQVESEEQGL-NPDEEELKLDVGL 1551
E PE++ S D ++ D + T ID++ A++E Q L +P +E +
Sbjct: 827 DLE---LPEDFDLSLADEIETDQASQAFATEIDDVNAELERLSQNLEHPPLDEPRFTA-- 881
Query: 1552 DEFPDVIGDIRDIDVDSGA-EAAGKLDLAKIYIEMNDEKGAIKLLEEAIVDGDDEIRQQA 1610
E + D D D +G EAA KLDLA+ YI+M D GA +L+E + +GDD + +A
Sbjct: 882 -EDAAALDDEPDFDFMAGTDEAATKLDLARAYIDMGDADGARDILDEVVTEGDDGQKSEA 940
Query: 1611 KRLIDVL 1617
+ ++ L
Sbjct: 941 REMLSRL 947
Score = 66.6 bits (161), Expect = 1e-14
Identities = 122/540 (22%), Positives = 206/540 (38%), Gaps = 96/540 (17%)
Query: 817 PEQTTATNETADELLADLAAQPQSNTVDTSDDALAPDGLSQ----SVEEPLTLNDLELPE 872
P+ T N L D P + + + P G ++ + E+PL + + +
Sbjct: 388 PDAATPANAAVPASLVDANGAPVKPAGEIAPEDALPAGAAEVATPAPEQPLAVEPVAAAD 447
Query: 873 ENDEPQLAEVTPSSA------------------FDEQQVETEIEPESEPLAAEASNDESD 914
E DE L ++ + F ++ + E E A A +ESD
Sbjct: 448 E-DEDALQKIINNPVLLGLIGGAVLLILALLLLFLARRRAAKAEAEKHKRMARALAEESD 506
Query: 915 LTALNELDLPEYTEEDVLA-----------------DVQLEPAAESEVE-------PDLE 950
+ +++ P + + + + +P ++E+ +E
Sbjct: 507 FVSDMDMNAPPASFDGLDVPPPNVRMGGAAAAAAGRERPADPLVQAEIHIAYGRMNQAIE 566
Query: 951 LVNEPVTEEAFTELDELDLPE-YTEED---ALADAQLEPVAESEVEPELDLASEPAEEEA 1006
L+ E V E+ + L L E Y E+ A A + + VA ++E AE E
Sbjct: 567 LLEEAVNEDPKRDDIRLKLMEIYAEQGNNKAYAAHERKLVAAGKLE---------AEVEQ 617
Query: 1007 FTELNKLDLPEYTEEDALADAQLESATESEVESELELVSEPAAEEAFTELDELDLPEYTE 1066
ELN P A A L S S + + ELD L E
Sbjct: 618 REELNSTLKPV-----APVAAPLASEASSAAPAVAAAAAAATTAALVAELDAKYLEELLA 672
Query: 1067 EDALADSQLEPAAESEVEPELELVSEPVTEEAFTELDELDLPEYTEEDALADAQLEPAVE 1126
+DA A+ EP E E EPE E+V+ P E A P E AD +
Sbjct: 673 DDA-AEQDAEPEPEPEPEPEPEIVATPEPEPAVV------APLAAEPVEEAD-----PFD 720
Query: 1127 SEVEPELELASEPAEEEASTELNELDLPEYTEEDALADAQLEPAAESEVESE-LELASDL 1185
++ + L+ EP+ E ST +N++D D + D EP + + E L S +
Sbjct: 721 NDFDLSLDEFEEPSVPEVST-VNDID-------DLMLD---EPKVSAVADDEALSFESVM 769
Query: 1186 EEEEPFTELNELDLPEYTEEDALADAQLEPAVESEVEPELELATEPAE----EEAFPELD 1241
+++E E P+ + L ++ +PA++SE + L L +P + P D
Sbjct: 770 QQQE---EARAATTPQDLADFDLDLSEEDPALKSEDDFLLGLGEDPLDLGETSPVPPVSD 826
Query: 1242 ELDLPEYTEEDALADAQLEPAAEAEVEPELELASDLEEKETFTELDELDLPEYTEEDALA 1301
+L+LPE + + + + A++A ++ ++LE E LD P +T EDA A
Sbjct: 827 DLELPEDFDLSLADEIETDQASQAFATEIDDVNAELERLSQNLEHPPLDEPRFTAEDAAA 886
Score = 58.9 bits (141), Expect = 3e-12
Identities = 49/183 (26%), Positives = 78/183 (42%), Gaps = 13/183 (7%)
Query: 84 TSANQTLWSIASQLRPSSSVTVQQTLLAIYQLNPQAFENQNIHTLIPGSTLRVPSLAQIS 143
T+ N TLW IA+++R TVQQT+LAI LNP AF NI+ L G LR+P+ Q +
Sbjct: 196 TANNDTLWEIAAKVRTGG--TVQQTMLAIQALNPDAFIGGNINRLKKGQVLRLPTPQQTT 253
Query: 144 RNSTQDAVNIMASHQAKLNQTPDTPVRPVAPPRPAPVATPKVEAVAQTPPQVTPTTAPQE 203
AV ++ + + R P T +V+A + P+
Sbjct: 254 ALPQSQAVAEVSRQYSAWRE-----------GRRLPAGTRQVDATRRDRAGAAPSKVDTS 302
Query: 204 KAPTELKTPAKPSQSTDAEVMALEEKNHTLRLMLSQVQSEVSTLKEELGDENRIRSEVER 263
+ + KP+ A L K + L + + + LK + D +++R
Sbjct: 303 DNLSLVSASGKPAAKGAAGDGDLGNKLAVAQEALDTTRRDNAELKSRMNDLQSQLDKLQR 362
Query: 264 LLE 266
L+E
Sbjct: 363 LVE 365
Score = 57.4 bits (137), Expect = 8e-12
Identities = 85/315 (26%), Positives = 133/315 (42%), Gaps = 62/315 (19%)
Query: 897 IEPESEPLAAEASNDESDLTA----------LNELDLPEYTEE---DVLADVQLEPAAES 943
+ P + PLA+EAS+ + A + ELD +Y EE D A+ EP E
Sbjct: 628 VAPVAAPLASEASSAAPAVAAAAAAATTAALVAELDA-KYLEELLADDAAEQDAEPEPEP 686
Query: 944 EVEPDLELVNEPVTEEAFTELDELDLPEYTEEDALADAQLEPVAESE-VEPELDLASEPA 1002
E EP+ E+V P E A +A EPV E++ + + DL+ +
Sbjct: 687 EPEPEPEIVATPEPEPA----------------VVAPLAAEPVEEADPFDNDFDLSLDEF 730
Query: 1003 EEEAFTELNKLDLPEYTEEDALADAQLESATESEVESELELVSEPAAEEAFTELDELDLP 1062
EE + E++ ++ +D + D SA + E V + EEA DL
Sbjct: 731 EEPSVPEVSTVN----DIDDLMLDEPKVSAVADDEALSFESVMQ-QQEEARAATTPQDLA 785
Query: 1063 EYTEEDALADSQLEPAAESEVEPELELVSEPV----TEEAFTELDELDLPEYTEEDALAD 1118
++ L S+ +PA +SE + L L +P+ T D+L+LPE + +
Sbjct: 786 DFD----LDLSEEDPALKSEDDFLLGLGEDPLDLGETSPVPPVSDDLELPEDFDLSLADE 841
Query: 1119 AQLEPAVES------EVEPELELASEPAEEEASTELNELDLPEYTEEDALADAQLEP--- 1169
+ + A ++ +V ELE S+ E LD P +T EDA A EP
Sbjct: 842 IETDQASQAFATEIDDVNAELERLSQNLEHP------PLDEPRFTAEDAAA-LDDEPDFD 894
Query: 1170 --AAESEVESELELA 1182
A E ++L+LA
Sbjct: 895 FMAGTDEAATKLDLA 909
Score = 50.4 bits (119), Expect = 9e-10
Identities = 62/237 (26%), Positives = 88/237 (37%), Gaps = 25/237 (10%)
Query: 382 ADLNETDLDFNLDGQDSDDLFVGIDDDGDLDTEFDALNESANGISVNADDKALGLEEMER 441
AD + D D +LD + + + + D L +S ADD+AL E + +
Sbjct: 716 ADPFDNDFDLSLDEFEEPSV-----PEVSTVNDIDDLMLDEPKVSAVADDEALSFESVMQ 770
Query: 442 ALNDVSEPTDNDDLNSFDL----ADENQMSEDDIEALLSGDE----ENELLSDGKVDQSL 493
+ T DL FDL D SEDD L D E + D L
Sbjct: 771 QQEEARAATTPQDLADFDLDLSEEDPALKSEDDFLLGLGEDPLDLGETSPVPPVSDDLEL 830
Query: 494 LDDLLASELDALDDEPAIQDTETLDTLLNDELASLSEE------DDDEFDLSGAGVAGDQ 547
+D S D ++ + A Q T +N EL LS+ D+ F A D+
Sbjct: 831 PEDFDLSLADEIETDQASQAFATEIDDVNAELERLSQNLEHPPLDEPRFTAEDAAALDDE 890
Query: 548 DLDDLFASIEEQADLEQLEAKAID------ETALLDEILAEQDAPLSEESTELLDEL 598
D A +E A L ID +LDE++ E D E+ E+L L
Sbjct: 891 PDFDFMAGTDEAATKLDLARAYIDMGDADGARDILDEVVTEGDDGQKSEAREMLSRL 947
Score = 33.5 bits (75), Expect = 1e-04
Identities = 57/248 (22%), Positives = 96/248 (38%), Gaps = 57/248 (22%)
Query: 488 KVDQSLLDDLLASELDALD----------DEPAIQDTETLDTLLNDELASLSEED----D 533
++D L++LLA + D EP I T + + LA+ E+ D
Sbjct: 661 ELDAKYLEELLADDAAEQDAEPEPEPEPEPEPEIVATPEPEPAVVAPLAAEPVEEADPFD 720
Query: 534 DEFDLS--------GAGVAGDQDLDDLFASIEEQADLEQLEAKAIDETALLDEILAEQDA 585
++FDLS V+ D+DDL D ++ A A DE + ++ +Q+
Sbjct: 721 NDFDLSLDEFEEPSVPEVSTVNDIDDLML------DEPKVSAVADDEALSFESVMQQQE- 773
Query: 586 PLSEESTELLDELLDDFDKPENDEFDAQTADLLQPEEPILDLEEDSTQLLNEVLGEPVPE 645
E + L DFD L E+P L E+D L E +P
Sbjct: 774 ---EARAATTPQDLADFDLD------------LSEEDPALKSEDDFLLGLGE---DP--- 812
Query: 646 ELASGLEIDQNSTELLDELLDDLDLDDESIEATEFSVAPEKLSVEDGTELFDELLEIEQH 705
+D T + + DDL+L ++ + + ++ S TE+ D E+E+
Sbjct: 813 -------LDLGETSPVPPVSDDLELPEDFDLSLADEIETDQASQAFATEIDDVNAELERL 865
Query: 706 PESAESLP 713
++ E P
Sbjct: 866 SQNLEHPP 873
Score = 32.7 bits (73), Expect = 2e-04
Identities = 52/225 (23%), Positives = 95/225 (42%), Gaps = 17/225 (7%)
Query: 460 LADENQMSEDDIEALLSGDEENELLSDGKVDQSLLDDLLASELDALD--DEPAIQDTETL 517
LAD+ + + E + E E+++ + + +++ L A ++ D D +
Sbjct: 671 LADDAAEQDAEPEPEPEPEPEPEIVATPEPEPAVVAPLAAEPVEEADPFDNDFDLSLDEF 730
Query: 518 DTLLNDELASLSEEDD---DEFDLSGAGVAGDQDLDDLFASIEEQADLEQLEAKAIDETA 574
+ E++++++ DD DE +S VA D+ L F S+ +Q + E A + A
Sbjct: 731 EEPSVPEVSTVNDIDDLMLDEPKVSA--VADDEALS--FESVMQQQE-EARAATTPQDLA 785
Query: 575 LLDEILAEQDAPLSEESTELLDELLDDFDKPENDEFDAQTADLLQPEEPILDLEEDSTQL 634
D L+E+D L E LL D D E + DL PE+ DL L
Sbjct: 786 DFDLDLSEEDPALKSEDDFLLGLGEDPLDLGETSPVPPVSDDLELPED--FDL-----SL 838
Query: 635 LNEVLGEPVPEELASGLEIDQNSTELLDELLDDLDLDDESIEATE 679
+E+ + + A+ ++ E L + L+ LD+ A +
Sbjct: 839 ADEIETDQASQAFATEIDDVNAELERLSQNLEHPPLDEPRFTAED 883
Score = 29.6 bits (65), Expect = 0.002
Identities = 36/161 (22%), Positives = 59/161 (36%), Gaps = 15/161 (9%)
Query: 94 ASQLRPSSSVTVQQTLLAIYQLNPQAFENQNIHTLIPG----STLRVPSLAQISRNSTQD 149
A+Q+ PS + T + + QAF N T + S LR+ S + +
Sbjct: 54 ATQVVPSLATTADFAQAGVTR---QAFLNDLTFTPVINASGKSVLRITSSKPVREPYVKF 110
Query: 150 AVNIM-------ASHQAKLNQTPDTPVRPVAPPRPAPVATPKVEAVAQTPPQVTPTTAPQ 202
V ++ + L+ +P A PAP A P A T A +
Sbjct: 111 LVQVLWPNGRLLREYSLLLDPPKFSPEAAAAAAAPAPAAAPAAPAQLATVAPSAEAPAAE 170
Query: 203 EKAPTELKTPAK-PSQSTDAEVMALEEKNHTLRLMLSQVQS 242
AP PA P + D + + N TL + ++V++
Sbjct: 171 APAPAPAANPAAVPPPAADKQSQYVTANNDTLWEIAAKVRT 211