Pairwise Alignments
Query, 1621 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056
Subject, 937 a.a., hypothetical protein (RefSeq) from Shewanella amazonensis SB2B
Score = 180 bits (457), Expect = 6e-49
Identities = 261/992 (26%), Positives = 416/992 (41%), Gaps = 155/992 (15%)
Query: 33 VAVMVVTQTSFV-SAESIRLVGPDGQVQPTPQYSENIVRNSANNEPGRFFGPTSANQTLW 91
+AV + Q S V +AE +++ GPDGQ + T R +GPT+ T W
Sbjct: 16 LAVSTIPQFSEVRAAEPLKITGPDGQSRETQS---------------RQYGPTTVQDTFW 60
Query: 92 SIASQLRPSSSVTVQQTLLAIYQLNPQAFENQNIHTLIPGSTLRVPS---LAQISRNSTQ 148
SIA ++RP +SV+V Q + AIY NP AF + N +TL G L +PS + I +N Q
Sbjct: 61 SIAQKVRPDNSVSVYQVMAAIYDANPHAFSSANYNTLEKGMILLIPSKEVMLAIPKNLAQ 120
Query: 149 DAV----NIMASHQAKLNQTPDTPV--RPVAPPRPAPVATP-KVEAVAQTPPQVTPTTAP 201
+ + + Q PV +P A P V P KVEA P V P
Sbjct: 121 QRALEQDRAWRTGKVEPKQATAKPVTAKPAAQEAPKAVTEPAKVEAKPAPVPVVDPKLVE 180
Query: 202 QEKA--------PTELKTPAKPSQSTDAEVMALEEKNHTLRLMLSQVQSEVSTLKEELGD 253
+ +A EL +S A+V L E+ TL+ L+ E E L
Sbjct: 181 ENQALSAEISRLTEELNVRKNDVESLSAQVEQLTEEVQTLKANLAATTEE----SEALRT 236
Query: 254 ENRIRSEVERLLEEERRKAEEASRLAPSALDNLLSNGWLVALLALIPGLLIAIVVLLLLN 313
EN+ + + L E E K E R +L+ + ++ L A++P LLI + V L L
Sbjct: 237 ENKTLKQAQALAEVEANKPGELWR-------SLMDSPLMLILGAVVPALLILMAVWLFLR 289
Query: 314 RRSSAQQENPTQNNITSEMPTAAPVTLG--------PEQTEDIGDDLLLDDDLFSTTDDK 365
RR + + +++ P AA G E+ I D ++ L S D
Sbjct: 290 RRRGGADGDVGETAKSADAPLAAAAAAGAVAVAASADEEEMAIRLDPEEEESLDSLLDMG 349
Query: 366 EENDAEKAFSDEDDVFADLNETDLDFNLDGQDSDDLF---VGIDDDGDLDTEFDA----- 417
+ A + +E + + D DF DGQ DDL+ +G D+G+L+ E +A
Sbjct: 350 NVDLAPETLPEETSADLFVEQAD-DFADDGQSLDDLWAEAMGEQDEGELNAEAEADLDAL 408
Query: 418 ---LNESANGISVNADDKAL--GLEEMERALNDVSE-PTDNDDLNSFDLAD------ENQ 465
E ++ D AL G +E E+ + E + D+L+ A+ ++
Sbjct: 409 MAGFEEETPDVAKEEDLDALLAGFDEPEQTITTTEESQPEKDELSDAIAAELETEVADDT 468
Query: 466 MSEDDIEALLSG-DEENELLSDGKV--DQSLLDDLLASELDALDDEPAIQDTETLDTLLN 522
+SEDD++ALL+G +E E +++ D++ DDL + L+ E A D + D L+
Sbjct: 469 VSEDDLDALLAGFNEPVEAMAESVADSDEAQSDDLAEAIAAELESELAGNDEVSSDEDLD 528
Query: 523 DELASLSEEDDDEFDLSGAGVAGDQDLDDLFASIEEQADLEQLEAKAIDETALLDEILAE 582
LA FD A A D DDL E + + EA A + L E+ AE
Sbjct: 529 ALLAG--------FD---APSASDDGEDDLKTPSTETLEADWSEAIAAE---LEGEVAAE 574
Query: 583 QDAPLSEESTELLDELLDDFDKPENDEFDAQTADLLQPEEPILDLEEDSTQLLNEVLGEP 642
E+ E LD LL F E +++ ++ L+ + +++T +++
Sbjct: 575 ------AEAEEDLDALLASF----ATESESEASNGLENSADDVLAADETTSPVDDAFANV 624
Query: 643 VPEELASGLEIDQNSTELLDELLDDLDLDDESIEATEFSVAPEKLSVEDGTELFDELLEI 702
+ EL+ D+N+ E L+ LL DLD DE+ +ED T + L +
Sbjct: 625 LESELSLA---DENADEDLNALLTDLDKGDEA-------------PIEDITAGLGDELPL 668
Query: 703 EQHPESAESLPELATEDEFNSDTFIDDLLNSAPAKDPLLEPVLDENEAFAQADDFDFNPE 762
+ +SL LA D+ D L +A N+ +A + D
Sbjct: 669 SDEDDDLDSL--LAGFDKEEETGLEDAALAAAAVATAASISAATSNKESEKASEKD--KT 724
Query: 763 IEGGLEDDLSQPSALPANEFGTPQDEDWVFDEDDSSPTLEGNAELELSS-AEDDLPEQTT 821
E G D + P A+ A + G FD+ G+ LE S A D + +
Sbjct: 725 AEKGAHD--ADPVAVSAKDSG-------FFDDLKGKKGAAGSNMLEWESIAPPDTKKPSL 775
Query: 822 ATNETADELLADLAAQPQSNTVDTSDDALAPD---GLSQSVEEPLTLNDLELPEENDEPQ 878
++ DELL+ AA+ D+ DDA D S +V+E L L+ E++
Sbjct: 776 DVSD--DELLSAFAAEHD----DSDDDAFVLDVDADHSMTVDEALAA--LDASEKSKRQS 827
Query: 879 LAEVTPS-SAFDEQQVETEIEPESEPLAAEASNDESDLTALNELDLPEYTEEDVLADVQL 937
AE+ S F ++ +I + L +A D+++ ELD+ E ++
Sbjct: 828 KAEIDADLSNFQKENGFIDI----DKLLNDA--DDTEPEPYRELDMDIGEVESLIGG--- 878
Query: 938 EPAAESEVEPDLELVNEPV-TEEAFTELDELD 968
AA +V+ + VN + A+ E+D+ D
Sbjct: 879 --AAMVDVDDEENSVNAKLDLARAYIEIDDKD 908
Score = 111 bits (278), Expect = 3e-28
Identities = 191/684 (27%), Positives = 300/684 (43%), Gaps = 108/684 (15%)
Query: 977 ALADAQLEPVAESEVEPELDLASEPAEEEAFTEL---NKLDL-PEYTEEDALADAQLESA 1032
A A A VA S E E+ + +P EEE+ L +DL PE E+ AD +E A
Sbjct: 312 AAAAAGAVAVAASADEEEMAIRLDPEEEESLDSLLDMGNVDLAPETLPEETSADLFVEQA 371
Query: 1033 TE--SEVESELELVSEPAAE--------EAFTELDELDLPEYTEE--DALADSQLEPAAE 1080
+ + +S +L +E E EA +LD L + + EE D + L+
Sbjct: 372 DDFADDGQSLDDLWAEAMGEQDEGELNAEAEADLDAL-MAGFEEETPDVAKEEDLDALLA 430
Query: 1081 SEVEPELELVSEPVTEEAFTELDELDLPEYTEEDALADAQLEPAVESEVEPELELAS--- 1137
EPE + + TEE+ E DEL DA+A A+LE V + E +L +
Sbjct: 431 GFDEPEQTITT---TEESQPEKDELS-------DAIA-AELETEVADDTVSEDDLDALLA 479
Query: 1138 ---EPAEE--EASTELNELDLPEYTEEDALADAQLEPAAESEVESELEL----------- 1181
EP E E+ + +E + E A A+ + E A EV S+ +L
Sbjct: 480 GFNEPVEAMAESVADSDEAQSDDLAEAIA-AELESELAGNDEVSSDEDLDALLAGFDAPS 538
Query: 1182 ASDLEEEE---PFTELNELDLPEYTEEDALADAQLEPAVESEVEPELELATEPAEEEAFP 1238
ASD E++ P TE E D E A+A A+LE V +E E E +L A
Sbjct: 539 ASDDGEDDLKTPSTETLEADWSE-----AIA-AELEGEVAAEAEAEEDLDALLASFATES 592
Query: 1239 ELDELDLPEYTEEDALA-DAQLEPAAEA---EVEPELELASDLEEKETFTELDELDL-PE 1293
E + + E + +D LA D P +A +E EL LA + +++ L +LD E
Sbjct: 593 ESEASNGLENSADDVLAADETTSPVDDAFANVLESELSLADENADEDLNALLTDLDKGDE 652
Query: 1294 YTEEDALADAQLE-PAAESEVEPELELASVLEEEDSFTELDELDLPEYTEKDALADAQLE 1352
ED A E P ++ + + + LA +EE+ T L++ L A+A A
Sbjct: 653 APIEDITAGLGDELPLSDEDDDLDSLLAGFDKEEE--TGLEDAALAAA----AVATAASI 706
Query: 1353 PAAESEVEPELGDETETLAQETESDALVADEDLLASVESAV-DEVQPELLGATQDVPPTQ 1411
AA S E E E + A++ DA D +++ +S D+++ + A ++ +
Sbjct: 707 SAATSNKESEKASEKDKTAEKGAHDA---DPVAVSAKDSGFFDDLKGKKGAAGSNMLEWE 763
Query: 1412 SLANKAFDEEALHDWLSDNPDGEKPFSFDRPLDAKTIDSAGMDIDAMLQMGGEDWNGFHL 1471
S+A + +L D D E +F D D+ +D+DA M
Sbjct: 764 SIAPPDTKKPSL-----DVSDDELLSAFAAEHDDSDDDAFVLDVDADHSM---------- 808
Query: 1472 TPDQQAQLPDDVPEDEQAIWASETPEPQAKPENWGSQEDLLDFDPQRDGYMTIDELMAQV 1531
V E A+ ASE + Q+K E DL +F + +G++ ID+L+
Sbjct: 809 ----------TVDEALAALDASEKSKRQSKAE---IDADLSNFQKE-NGFIDIDKLLNDA 854
Query: 1532 ESEEQGLNPDEEELKLDVGLDEFPDVIGDIRDIDVDSGAEAAG-KLDLAKIYIEMNDEKG 1590
+ E E +LD+ + E +IG +DVD + KLDLA+ YIE++D+
Sbjct: 855 DDTEP-----EPYRELDMDIGEVESLIGGAAMVDVDDEENSVNAKLDLARAYIEIDDKDS 909
Query: 1591 AIKLLEEAIVDGDDEIRQQAKRLI 1614
A LL+E +DG++ +Q+A L+
Sbjct: 910 AKALLKEVEMDGNERQKQEAANLL 933
Score = 77.8 bits (190), Expect = 5e-18
Identities = 149/614 (24%), Positives = 252/614 (41%), Gaps = 61/614 (9%)
Query: 694 ELFDELLEIEQHPESAESLPELATEDEFNSDTFIDDLLNSAPAKDPLLEPVLDENEAFAQ 753
E D LL++ + E+LPE + D F DD + + D L EA +
Sbjct: 340 ESLDSLLDMGNVDLAPETLPEETSADLFVEQA--DDFADDGQSLDDLWA------EAMGE 391
Query: 754 ADDFDFNPEIEGGLEDDLSQPSALPANEFGTPQDEDWVFDEDDSSPTLEGNAELE--LSS 811
D+ + N E E L+ AL A G ++ V E+D L G E E +++
Sbjct: 392 QDEGELNAEAEADLD-------ALMA---GFEEETPDVAKEEDLDALLAGFDEPEQTITT 441
Query: 812 AEDDLPEQTTATNETADELLADLAAQPQSNTVDTSD-DALAPDGLSQSVE---EPLTLND 867
E+ PE+ +E +D + A+L + +TV D DAL G ++ VE E + +D
Sbjct: 442 TEESQPEK----DELSDAIAAELETEVADDTVSEDDLDALLA-GFNEPVEAMAESVADSD 496
Query: 868 LELPEENDEPQLAEVTPSSAF-DEQQVETEIEPESEPLAAEASND--ESDLTALNELDLP 924
++ E AE+ A DE + +++ A +++D E DL + L
Sbjct: 497 EAQSDDLAEAIAAELESELAGNDEVSSDEDLDALLAGFDAPSASDDGEDDLKTPSTETLE 556
Query: 925 EYTEEDVLADVQLEPAAESEVEPDLELVNEPVTEEAFTELDELDLPEYTEEDALADAQLE 984
E + A+++ E AAE+E E DL+ + E+ +E L ++ AD
Sbjct: 557 ADWSEAIAAELEGEVAAEAEAEEDLDALLASFATESESEASN-GLENSADDVLAADETTS 615
Query: 985 PVAE---SEVEPELDLASEPAEEEAFTELNKLDLPEYTEEDALADAQLESATESEVESEL 1041
PV + + +E EL LA E A+E+ L LD + + + + S+ + +L
Sbjct: 616 PVDDAFANVLESELSLADENADEDLNALLTDLDKGDEAPIEDITAGLGDELPLSDEDDDL 675
Query: 1042 ELVSEPAAEEAFTELDELDLPEYTEEDALADSQLEPAAESEVEPELELVSE-------PV 1094
+ + +E T L++ L A + S ESE E + +E PV
Sbjct: 676 DSLLAGFDKEEETGLEDAALAAAAVATAASISAATSNKESEKASEKDKTAEKGAHDADPV 735
Query: 1095 TEEAFTE--LDELDLPEYTEEDALADAQLEPAVESEVEPELELASEPAEEEASTELNELD 1152
A D+L ++ A LE ES P+ +P+ + + EL
Sbjct: 736 AVSAKDSGFFDDLK----GKKGAAGSNMLE--WESIAPPD---TKKPSLDVSDDELLSAF 786
Query: 1153 LPEYTEEDALADAQLEPAAESEVESELELASDLEEEEPFTELNEL--DLPEYTEEDALAD 1210
E+ + D A A S E A D E+ E+ DL + +E+ D
Sbjct: 787 AAEHDDSDDDAFVLDVDADHSMTVDEALAALDASEKSKRQSKAEIDADLSNFQKENGFID 846
Query: 1211 AQ--LEPAVESEVEPELELATEPAEEEAFPELDELDLPEYTEEDALADAQLEPA-AEAEV 1267
L A ++E EP EL + E E+ + + + +E+ +A+L+ A A E+
Sbjct: 847 IDKLLNDADDTEPEPYRELDMDIGEVESL--IGGAAMVDVDDEENSVNAKLDLARAYIEI 904
Query: 1268 EPELELASDLEEKE 1281
+ + + L+E E
Sbjct: 905 DDKDSAKALLKEVE 918