Pairwise Alignments
Query, 1621 a.a., hypothetical protein from Vibrio cholerae E7946 ATCC 55056
Subject, 895 a.a., hypothetical protein (RefSeq) from Shewanella loihica PV-4
Score = 162 bits (410), Expect = 2e-43
Identities = 203/846 (23%), Positives = 362/846 (42%), Gaps = 98/846 (11%)
Query: 30 LLPVAVMVVTQTSFV--SAESIRLVGPDGQVQPTPQYSENIVRNSANNEPGRFFGPTSAN 87
LL A++V++ TS + +AE + + GPDG+ + T R +GPT+A+
Sbjct: 11 LLASALLVLSSTSGLLSAAEPLNITGPDGESRQTL----------------RQYGPTTAS 54
Query: 88 QTLWSIASQLRPSSSVTVQQTLLAIYQLNPQAFENQNIHTLIPGSTLRVPSLAQISRNST 147
T WSIA + RP +SVT+ Q + AIY+ NP AF + N ++L G L +PS +
Sbjct: 55 DTFWSIAQKTRPDASVTIYQVMAAIYEANPHAFTSDNYNSLEKGMILLIPSKEVMLAIPK 114
Query: 148 QDAVNIMASHQAKLNQTPDTPVRPVAPPRPAPVATPKVEAVAQTPPQVTPTTAPQEKAPT 207
A S+ Q P T A P+P T + +A + P++ P +
Sbjct: 115 SLAKQQAESNDKGWRQKPQT----AAKPKPVVTQTKQAQASEASQPEMVQADKPSAEQQK 170
Query: 208 ELKTPAKPSQSTDAEVMALEEK--------------NHTLRLMLSQVQSEVSTLKEELGD 253
+++ ++ A+ ++L ++ + L+ + + S ++ L+E L
Sbjct: 171 QIEALTAKLEAEQAKNLSLTDELARAQDKLNLGNNDSEMLQAKIDEQSSRIAELEEALLV 230
Query: 254 ENRIRSEVERLLEEERRKAEEASRLA-PSALDN----LLSNGWLVALLALIPGLLIAIVV 308
+ ++++ +E+ R++ A++ A P +D+ ++ N + L A IP LL+ ++V
Sbjct: 231 QKEQKAQLNSEVEQLRQQLAAATQPAKPKEVDDSWRTMMDNPLYLGLFAAIPALLLLVLV 290
Query: 309 LLLLNRRSSAQQENPTQNNITSEMPTAAPVTLGPEQTEDIGDDLLLDDDLFSTTDDKEEN 368
L + RR++ + + +T M PV PE +E++ L DD + D +
Sbjct: 291 WLFIKRRNNKSEAVESSTPVTPPMDD-KPVAPAPEDSEEMMAVHLDTDDEADSLDSLMKV 349
Query: 369 DAEKAFSDEDDVFADLNETDLDFNLDGQDSDDLFVGIDDDG----DLDTEFDALNESANG 424
D E E D+ +L + + +D D + + ++D+G DL E E
Sbjct: 350 D-ETQLKPEADLSDELPQEAAEMVVDAGD-EQVMSPVEDEGQSLDDLWAEAMGEQEQEEA 407
Query: 425 ISVNADDKALGLEEMERALNDVSEPTDNDDLNSFDLA------DENQMSEDDIEALLSGD 478
+ DD L E++ E T ++ + + A +E E D++ LL+
Sbjct: 408 KATQEDDLDSLLAELDAPQEAPIEETHVEEKSIEETAFEAPVLEEEATPETDLDELLAEF 467
Query: 479 EENELLSDGKVDQSLLDDLLASELDALDDEPAIQDTETLDTLLNDELASLSEEDDDEFDL 538
E+ D K + LD LLA E D + D ++ + E SL E +E
Sbjct: 468 EQETPSEDAKEED--LDALLA-EFDL--PAETVNDETNVEEEIRAEETSLEEIKPEE--- 519
Query: 539 SGAGVAGDQDLDDLFASIEEQADLEQLEAKAIDETALLDEILAEQDAPLSEESTELLD-- 596
+ A ++ L D A E+A + + +DET LD +LA DA + ++++ D
Sbjct: 520 AAEPEASEETLADEIAQELEEAIEAKGDEGDVDETD-LDALLAGFDAEPAAQASDSEDDE 578
Query: 597 -------ELLDDFDKPENDEFDAQTADLLQPEEPILDLEED--STQLLNEVLGEPVPEEL 647
EL ++ D+ E + DA A+ +P P + E D +L + E PEE
Sbjct: 579 IARQIAAELEEENDEVEEADLDALLAE-FEPAAPASEPEADVADLELAEDEAEETAPEET 637
Query: 648 ASGLEIDQNSTELLDE--------LLDDLDLDDESIEATEFSVAPEKLSVEDGTEL-FDE 698
L++ +E L DL D ++EA A E++ ED E+ D
Sbjct: 638 GPELDVAAELAAEQEESKSAGHAPLEFDLGEDKPAVEAD----AEEEIKAEDDGEVDLDA 693
Query: 699 LLEIEQHPESAESLPELATEDEFNSDTFIDDLLNSAPAKDPLL--EPVLDENEAFAQ--- 753
LL + E AE P++ E F DL + + D +L E L + AQ
Sbjct: 694 LLADLESVEEAEE-PKV----EKGESGFFGDLKGNKRSSDNMLEWESALTSDAPSAQETP 748
Query: 754 ADDFDFNPEIEGGLEDDLSQPSALPANEFGTPQDEDWVFDEDDSSPTLEGNAELELSSAE 813
+D D ++ +D+L+ AL A + + E D + + N +++
Sbjct: 749 VEDDDDGISLQLDDDDNLTVDQALAALDAAEKKRPARAVPEHDLTAFQQDNGFIDIDRLL 808
Query: 814 DDLPEQ 819
++ E+
Sbjct: 809 NEADEE 814
Score = 151 bits (381), Expect = 4e-40
Identities = 234/854 (27%), Positives = 373/854 (43%), Gaps = 149/854 (17%)
Query: 808 ELSSAEDDLPEQTTATNETADE------LLADLAAQPQSNTVDTSDDALAPDGLSQSVEE 861
+ ++E PE A +A++ L A L A+ N T + A A D L+
Sbjct: 147 QAQASEASQPEMVQADKPSAEQQKQIEALTAKLEAEQAKNLSLTDELARAQDKLN----- 201
Query: 862 PLTLNDLELPEENDEPQ---LAEVTPSSAFDEQQ---VETEIEPESEPLAAE---ASNDE 912
L ND E+ + + Q +AE+ + ++Q + +E+E + LAA A E
Sbjct: 202 -LGNNDSEMLQAKIDEQSSRIAELEEALLVQKEQKAQLNSEVEQLRQQLAAATQPAKPKE 260
Query: 913 SDLTALNELDLPEYTEEDVLADVQL---------------EPAAESEVEPDLELVNEPVT 957
D + +D P Y L A ES + ++PV
Sbjct: 261 VDDSWRTMMDNPLYLGLFAAIPALLLLVLVWLFIKRRNNKSEAVESSTPVTPPMDDKPVA 320
Query: 958 EEAFTELDELDLPEYTEEDALADAQLEPVAESEVEPELDLASEPAEEEAFTELNKLD--- 1014
+ + + T+++A + L V E++++PE DL+ E +E A ++ D
Sbjct: 321 PAPEDSEEMMAVHLDTDDEADSLDSLMKVDETQLKPEADLSDELPQEAAEMVVDAGDEQV 380
Query: 1015 -LPEYTEEDALADAQLESATESEVESELELVSEPAAEEAFTELDELDLPEYTEEDALADS 1073
P E +L D E+ E E E E + E + ELD +E + ++
Sbjct: 381 MSPVEDEGQSLDDLWAEAMGEQEQE-EAKATQEDDLDSLLAELDA------PQEAPIEET 433
Query: 1074 QLEPAAESEVEPELELVSEPVTEEAFTELDELDLPEYTEEDALADAQLEPAVESEVEPEL 1133
+E + E E ++ E T E T+LDEL L E+ +E DA+ E + E
Sbjct: 434 HVEEKSIEETAFEAPVLEEEATPE--TDLDEL-LAEFEQETPSEDAKEEDL--DALLAEF 488
Query: 1134 ELASEPAEEEASTELNELDLPEYTEEDALADAQLEPAAESEVESELELASDLEEEEPFTE 1193
+L +E +E + E E+ E + E+ + EP A E ++ E+A +LEE +
Sbjct: 489 DLPAETVNDETNVE-EEIRAEETSLEEIKPEEAAEPEASEETLAD-EIAQELEEAIE-AK 545
Query: 1194 LNELDLPEYTEEDALADAQLEPAVESEVEPELELATEPAEE--EAFPELDELDLPEYTEE 1251
+E D+ E + LA EPA ++ + E+A + A E E E++E DL
Sbjct: 546 GDEGDVDETDLDALLAGFDAEPAAQASDSEDDEIARQIAAELEEENDEVEEADL------ 599
Query: 1252 DALADAQLEPAAEAEVEPELELASDLEEKETFTELDELDLPEYTEEDALADAQLEPAAES 1311
DAL A+ EPAA A EPE ++A DLE LA+ + E A
Sbjct: 600 DALL-AEFEPAAPAS-EPEADVA-DLE---------------------LAEDEAEETAPE 635
Query: 1312 EVEPELELASVL--EEEDSFTELD---ELDLPEYTEKDALADAQLEPAAESEVEPELGDE 1366
E PEL++A+ L E+E+S + E DL E +PA E++ E E+ E
Sbjct: 636 ETGPELDVAAELAAEQEESKSAGHAPLEFDLGED-----------KPAVEADAEEEIKAE 684
Query: 1367 TETLAQETESDALVADEDLLASVESAVD-EVQPELLGATQDVPPTQSLANKAFDEEALHD 1425
+ E + DAL+AD L SVE A + +V+ G D+ NK + L +
Sbjct: 685 DDG---EVDLDALLAD---LESVEEAEEPKVEKGESGFFGDLK-----GNKRSSDNML-E 732
Query: 1426 WLSDNPDGEKPFSFDRPLDAKTIDSAGMDIDAMLQMGGEDWNGFHLTPDQQAQLPDDVPE 1485
W E + D P A+ D LQ+ +D +LT DQ D
Sbjct: 733 W-------ESALTSDAP-SAQETPVEDDDDGISLQLDDDD----NLTVDQALAALD---- 776
Query: 1486 DEQAIWASETPEP-QAKPENWGSQEDLLDFDPQRDGYMTIDELMAQVESEEQGLNPDEEE 1544
A+E P +A PE+ DL F Q +G++ ID L+ + + E+ ++ +E
Sbjct: 777 ------AAEKKRPARAVPEH-----DLTAFQ-QDNGFIDIDRLLNEADEEQLDVDKYKE- 823
Query: 1545 LKLDVGLDEFPDVIGDIRDIDVDSGAEAAG-KLDLAKIYIEMNDEKGAIKLLEEAIVDGD 1603
LDV + E ++G+ +DVD A KLDLA+ YIE++D A LL+E +DG+
Sbjct: 824 --LDVDMGELDSLMGNAAMVDVDDEENAVNAKLDLARAYIEIDDMDSAKALLKEVELDGN 881
Query: 1604 DEIRQQAKRLIDVL 1617
+ +Q+AK+L+D L
Sbjct: 882 ERQQQEAKKLLDEL 895
Score = 73.9 bits (180), Expect = 7e-17
Identities = 161/611 (26%), Positives = 250/611 (40%), Gaps = 106/611 (17%)
Query: 501 ELDALD-----DEPAIQDTETLDTLLNDELASLSEEDDDEFDLSGAGVAGDQDLDDLFAS 555
E D+LD DE ++ L L E A + + DE +S G Q LDDL+A
Sbjct: 339 EADSLDSLMKVDETQLKPEADLSDELPQEAAEMVVDAGDEQVMSPVEDEG-QSLDDLWA- 396
Query: 556 IEEQADLEQLEAKAIDETALLDEILAEQDAPLSEESTELLDELLDDFDKPENDEFDAQTA 615
E + EQ EAKA E L D +LAE DAP ++E + E F+A
Sbjct: 397 -EAMGEQEQEEAKATQEDDL-DSLLAELDAPQEAP----IEETHVEEKSIEETAFEA--- 447
Query: 616 DLLQPEEPILDLEEDSTQLLNEVLGEPVPEELASGLEIDQNSTELLDELLDDLDLDDESI 675
P+L+ E L+E+L E +E S + E LD LL + DL E++
Sbjct: 448 -------PVLEEEATPETDLDELLAE-FEQETPS----EDAKEEDLDALLAEFDLPAETV 495
Query: 676 EATEFSVAPEKLSVEDGTELFDELLEIEQHPESAESL-PELATEDEFNSDTFIDDLLN-- 732
++ +VE+ EI S E + PE A E E + +T D++
Sbjct: 496 N--------DETNVEE---------EIRAEETSLEEIKPEEAAEPEASEETLADEIAQEL 538
Query: 733 --SAPAKDPLLEPVLDENEAFAQADDFDFNPEIEGG--LEDDLSQPSALPANEFGTPQDE 788
+ AK E +DE + A FD P + +D++++ A E +E
Sbjct: 539 EEAIEAKGD--EGDVDETDLDALLAGFDAEPAAQASDSEDDEIARQIAAELEEENDEVEE 596
Query: 789 ---DWVFDE-DDSSPTLEGNAE---LELSS--AEDDLPEQTTATNETADELLA------- 832
D + E + ++P E A+ LEL+ AE+ PE+T + A EL A
Sbjct: 597 ADLDALLAEFEPAAPASEPEADVADLELAEDEAEETAPEETGPELDVAAELAAEQEESKS 656
Query: 833 --------DLAAQPQSNTVDTSDDALAPDGLSQSVEEPLTLNDLELPEENDEPQL----- 879
DL + D ++ A D V+ L DLE EE +EP++
Sbjct: 657 AGHAPLEFDLGEDKPAVEADAEEEIKAED--DGEVDLDALLADLESVEEAEEPKVEKGES 714
Query: 880 ---AEVTPSSAFDEQQVETEIEPESEPLAAEAS--NDESDLTALNELDLPEYTEEDVLAD 934
++ + + +E E S+ +A+ + D+ D +L D T + LA
Sbjct: 715 GFFGDLKGNKRSSDNMLEWESALTSDAPSAQETPVEDDDDGISLQLDDDDNLTVDQALAA 774
Query: 935 V---QLEPAAESEVEPDLELVNEPVTEEAFTELDELDLPEYTEEDALADAQLE-PVAESE 990
+ + + A + E DL + + F ++D L L E EE D E V E
Sbjct: 775 LDAAEKKRPARAVPEHDLTAFQQ---DNGFIDIDRL-LNEADEEQLDVDKYKELDVDMGE 830
Query: 991 VEPELDLASEPAEEEAFTELN-KLDLPE-YTEEDALADAQLESATESEVESELELVSEPA 1048
++ + A+ ++ +N KLDL Y E D + A+ A EVE + +E
Sbjct: 831 LDSLMGNAAMVDVDDEENAVNAKLDLARAYIEIDDMDSAK---ALLKEVELD---GNERQ 884
Query: 1049 AEEAFTELDEL 1059
+EA LDEL
Sbjct: 885 QQEAKKLLDEL 895