Pairwise Alignments

Query, 556 a.a., glutamine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 576 a.a., glutaminyl-tRNA synthetase from Pseudomonas stutzeri RCH2

 Score =  697 bits (1798), Expect = 0.0
 Identities = 340/548 (62%), Positives = 419/548 (76%), Gaps = 6/548 (1%)

Query: 9   SNFIRQIIDKDLADGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDD 68
           SNF+R I+  DL  GKH  + TRFPPEPNGYLHIGHAKSICLNFG+A+++ G+CNLRFDD
Sbjct: 31  SNFLRPIVQTDLDSGKHAKIVTRFPPEPNGYLHIGHAKSICLNFGLAKEFGGECNLRFDD 90

Query: 69  TNPEKENLEYVESIKKDVTWLGFDWSGEVCYSSDYFDKLYEYAIELIQKGLAYVDELTPE 128
           TNP KE+ EY+++IK DV WLGF W+GE  Y+S+YFD+L+E+A+ LI+ G AYV +LT E
Sbjct: 91  TNPAKEDQEYIDAIKTDVEWLGFQWAGEERYASNYFDQLHEWAVHLIKAGKAYVCDLTSE 150

Query: 129 QIREYRGTLTEPGKHSPYRDRSVEENLALFEKMRAGEFAEGQACLRAKIDMASSFIVMRD 188
           Q REYRG+LTEPG++SP+R+RSVEENL LF +M+AGEF +G   LRAKIDMAS  + +RD
Sbjct: 151 QAREYRGSLTEPGRNSPFRERSVEENLDLFARMKAGEFPDGARALRAKIDMASPNMNLRD 210

Query: 189 PVLYRVRFAEHHQTGDKWCIYPMYDFTHCISDALEGITHSICTLEFQDNRRLYDWVLDNI 248
           P+LYR+R A HHQTGDKWCIYP YDFTH  SDA+EGITHSICTLEF+D+R LY+W L N+
Sbjct: 211 PILYRIRHAHHHQTGDKWCIYPSYDFTHGQSDAIEGITHSICTLEFEDHRPLYEWFLANL 270

Query: 249 TIPCHPRQYEFSRLNLEYTVMSKRKLNQLVTEKLVTGWDDPRMPTISGLRRRGFTPSAIR 308
            +P  PRQYEF+RLNL YT+ SKRKL QLV EK V+GWDDPRM T+SG RRRG+TP++IR
Sbjct: 271 PVPAQPRQYEFARLNLNYTITSKRKLKQLVDEKHVSGWDDPRMSTLSGFRRRGYTPASIR 330

Query: 309 EFCKRIGVTKQENMIEYSALESCIRDDLNENAPRAMAVLDPVKLVIENFAAGTVETLTLA 368
            FC  IGV +   +++   LE  IR+DL+ NA RAM VL P+K+VI N+  G VE L L 
Sbjct: 331 NFCDMIGVNRAGGVVDIGMLEFAIREDLDANAARAMCVLKPLKVVITNYPEGQVENLELP 390

Query: 369 NHPNKPEMGDREVPFTRELWIEREDFREEANKKYKRLVLGKEVRLRGAYVIKAERIEKDE 428
            HP K +MG R +PF+RE++I+  DF E     +KRL+ G EVRLRG+YVI+A+   KDE
Sbjct: 391 RHP-KQDMGVRVLPFSREIYIDTSDFEEVPPAGFKRLIPGGEVRLRGSYVIRADEAVKDE 449

Query: 429 QGNITTIFCSYDPETLGKNPADGRKVKGVIHWVSAEKGVPAEFRLYERLFTVPNPGAAD- 487
            GNI  + CSYD  TLGKNP +GRKVKGVIHWV A + V  E RLY+RLF   NP   + 
Sbjct: 450 AGNIVELRCSYDDNTLGKNP-EGRKVKGVIHWVPAAESVECEVRLYDRLFRSANPEKDEE 508

Query: 488 --NFAETINPESLVKVQG-YVEPSLVEAKPEFGYQFERMGYFCADNKDSSPQALVFNRTV 544
             +F + INPESLV ++G   EPSL  A+PE  +QFER GYFCAD KDS P A VFNRTV
Sbjct: 509 GGSFLDNINPESLVVLKGCRAEPSLANAEPEERFQFEREGYFCADLKDSKPGAPVFNRTV 568

Query: 545 GLRDSFAK 552
            LRDS+ +
Sbjct: 569 TLRDSWGQ 576