Pairwise Alignments

Query, 556 a.a., glutamine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 582 a.a., Glutaminyl-tRNA synthetase (EC 6.1.1.18) from Xanthomonas campestris pv. campestris strain 8004

 Score =  635 bits (1639), Expect = 0.0
 Identities = 315/570 (55%), Positives = 401/570 (70%), Gaps = 22/570 (3%)

Query: 4   AEARPSNFIRQIIDKDLADGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCN 63
           A A   +FIRQI+ +DLA GKHT + TRFPPEPNGYLHIGHAK+ICL+FG+A ++ G CN
Sbjct: 14  APAEKKDFIRQIVREDLASGKHTAIRTRFPPEPNGYLHIGHAKAICLDFGLAAEFGGLCN 73

Query: 64  LRFDDTNPEKENLEYVESIKKDVTWLGFDWSGEVCYSSDYFDKLYEYAIELIQKGLAYVD 123
           LR DDTNP KE+ E+V +I+ DV WLGF+W+ ++ ++SDYF+  Y  A +LI+ G A+V 
Sbjct: 74  LRLDDTNPAKEDPEFVVAIQDDVRWLGFEWA-QLRHASDYFEVYYLAAEKLIRDGHAFVC 132

Query: 124 ELTPEQIREYRGTLTEPGKHSPYRDRSVEENLALFEKMRAGEFAEGQACLRAKIDMASSF 183
           +L+ EQ+R+YRGTLTEPG++SP+R+RSV+ENL LF +MRAGEF +G   LRAKIDMAS  
Sbjct: 133 DLSAEQVRQYRGTLTEPGRNSPFRERSVDENLDLFRRMRAGEFPDGARTLRAKIDMASGN 192

Query: 184 IVMRDPVLYRVRFAEHHQTGDKWCIYPMYDFTHCISDALEGITHSICTLEFQDNRRLYDW 243
           I +RDP LYR++  EH  TG+ W IYPMYDF H + DA+EGITHS+CTLEF+D+R LYDW
Sbjct: 193 INLRDPALYRIKHVEHQNTGNAWPIYPMYDFAHSLGDAVEGITHSLCTLEFEDHRPLYDW 252

Query: 244 VLDNITIPCHP------------------RQYEFSRLNLEYTVMSKRKLNQLVTEKLVTG 285
            +D + +  HP                  RQ EFSRLN+ YTVMSKRKL  LV E+LV G
Sbjct: 253 CVDKVDLSGHPELLAPLLGKGYPKEAAKPRQIEFSRLNINYTVMSKRKLTALVEEQLVDG 312

Query: 286 WDDPRMPTISGLRRRGFTPSAIREFCKRIGVTKQENMIEYSALESCIRDDLNENAPRAMA 345
           WDDPRM T+ GLRRRG+TP+A+R F  R+G++KQ ++I++S LE C+R+DL+  A R MA
Sbjct: 313 WDDPRMYTLQGLRRRGYTPAAMRLFVDRVGISKQNSVIDFSVLEGCLREDLDAAAARRMA 372

Query: 346 VLDPVKLVIENFAAGTVETLTLANHPNKPEMGDREVPFTRELWIEREDFREEANKKYKRL 405
           V+DP+KLV+ N   G  ETL  +NHP     G REVPF RELWIEREDF E   K +KRL
Sbjct: 373 VIDPLKLVLTNLPEGHTETLQFSNHPKDESFGTREVPFARELWIEREDFAEVPPKGWKRL 432

Query: 406 VLGKEVRLRGAYVIKAERIEKDEQGNITTIFCSYDPETLGKNPADGRKVKGVIHWVSAEK 465
           V G E+RLRGA + + + + KD  G I  +    DPE+        RKVKG IHWVSA  
Sbjct: 433 VPGGEIRLRGAGIARVDEVIKDAAGEIVELRGWLDPESRPGMIGSNRKVKGTIHWVSAVH 492

Query: 466 GVPAEFRLYERLFTVPNP---GAADNFAETINPESLVKVQGYVEPSLVEAKPEFGYQFER 522
            V AE RLY+RLF+V  P        + + +NPES   V+GYVEPS  +A PE  +QFER
Sbjct: 493 AVEAEIRLYDRLFSVEKPDDESEGKTYRDYLNPESKRSVRGYVEPSAAQAAPEQAFQFER 552

Query: 523 MGYFCADNKDSSPQALVFNRTVGLRDSFAK 552
            GYF AD +D S     FNR+V LRD++AK
Sbjct: 553 TGYFVADRRDHSAATPAFNRSVTLRDTWAK 582