Pairwise Alignments

Query, 556 a.a., glutamine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 556 a.a., glutaminyl-tRNA synthetase (RefSeq) from Shewanella loihica PV-4

 Score =  849 bits (2194), Expect = 0.0
 Identities = 405/550 (73%), Positives = 462/550 (84%), Gaps = 3/550 (0%)

Query: 3   EAEARPSNFIRQIIDKDLADGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQC 62
           + E RPSNFIR IID+DL  GKHT VHTRFPPEPNGYLHIGHAKSICLNFG+AQDY+G C
Sbjct: 5   DTEVRPSNFIRNIIDEDLESGKHTRVHTRFPPEPNGYLHIGHAKSICLNFGLAQDYKGLC 64

Query: 63  NLRFDDTNPEKENLEYVESIKKDVTWLGFDWSGEVCYSSDYFDKLYEYAIELIQKGLAYV 122
           NLRFDDTNPEKE+++YV SI+ DV WLGF W GE+ YSS+YFD+L++YA+ELI KGLAYV
Sbjct: 65  NLRFDDTNPEKEDIDYVNSIQADVHWLGFQWDGEIRYSSNYFDQLHQYAVELINKGLAYV 124

Query: 123 DELTPEQIREYRGTLTEPGKHSPYRDRSVEENLALFEKMRAGEFAEGQACLRAKIDMASS 182
             L  EQ REYRGTL EPGK+SPYRD  VEENL LFEKMR GEF EG+  LRAKIDMAS 
Sbjct: 125 CFLNGEQTREYRGTLKEPGKNSPYRDTFVEENLELFEKMRKGEFKEGECALRAKIDMASP 184

Query: 183 FIVMRDPVLYRVRFAEHHQTGDKWCIYPMYDFTHCISDALEGITHSICTLEFQDNRRLYD 242
           F+ MRDPV+YR+RFA HHQTGDKWCIYPMYDFTHCISDALE ITHS+CTLEFQDNRRLYD
Sbjct: 185 FMCMRDPVIYRIRFAHHHQTGDKWCIYPMYDFTHCISDALEDITHSLCTLEFQDNRRLYD 244

Query: 243 WVLDNIT---IPCHPRQYEFSRLNLEYTVMSKRKLNQLVTEKLVTGWDDPRMPTISGLRR 299
           WVLDN+     P   RQYEFSRLNLEYT+MSKRKLN LV   LV+GWDDPRMPTI+GLRR
Sbjct: 245 WVLDNLDDFQAPNRTRQYEFSRLNLEYTLMSKRKLNDLVVRGLVSGWDDPRMPTIAGLRR 304

Query: 300 RGFTPSAIREFCKRIGVTKQENMIEYSALESCIRDDLNENAPRAMAVLDPVKLVIENFAA 359
           RG+TP+AIREFC+RIGVTKQENM+E S L++CIR++LNE+APRAMAV++PVK++IEN+  
Sbjct: 305 RGYTPAAIREFCRRIGVTKQENMVEVSMLDACIREELNEHAPRAMAVINPVKVIIENYPE 364

Query: 360 GTVETLTLANHPNKPEMGDREVPFTRELWIEREDFREEANKKYKRLVLGKEVRLRGAYVI 419
           G VE L+   HP    MG+RE+ F REL+I+ +DFREEANKKYKRL+ GKEVRLR AYVI
Sbjct: 365 GQVEKLSAPAHPTIESMGERELVFGRELYIDADDFREEANKKYKRLIQGKEVRLRNAYVI 424

Query: 420 KAERIEKDEQGNITTIFCSYDPETLGKNPADGRKVKGVIHWVSAEKGVPAEFRLYERLFT 479
           KAER +KDE GN+TTI+C+YD +TLGKNPADGRKVKGVIHWV A   VPAEFRLY+RLF 
Sbjct: 425 KAERCDKDEAGNVTTIYCTYDDQTLGKNPADGRKVKGVIHWVEATSAVPAEFRLYDRLFN 484

Query: 480 VPNPGAADNFAETINPESLVKVQGYVEPSLVEAKPEFGYQFERMGYFCADNKDSSPQALV 539
            PNP AA+   E +NP+SLV   G VEP LV A+ E  YQFER GYFCAD+KDSSP+ LV
Sbjct: 485 QPNPAAAETVDEVLNPKSLVVKHGLVEPGLVNAEAEKAYQFEREGYFCADSKDSSPEHLV 544

Query: 540 FNRTVGLRDS 549
           FN TV LRDS
Sbjct: 545 FNLTVALRDS 554