Pairwise Alignments

Query, 556 a.a., glutamine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 579 a.a., glutaminyl-tRNA synthetase (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  577 bits (1487), Expect = e-169
 Identities = 295/566 (52%), Positives = 381/566 (67%), Gaps = 22/566 (3%)

Query: 10  NFIRQIIDKDLADGKHT-TVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQCNLRFDD 68
           NFI Q ++KDL +GK+   V TRFPPEPNGYLHIGHAK+ICL+FGIA  + G CNLRFDD
Sbjct: 16  NFIEQAVEKDLKEGKNGGKVQTRFPPEPNGYLHIGHAKAICLDFGIAAKHGGVCNLRFDD 75

Query: 69  TNPEKENLEYVESIKKDVTWLGFDWSGEVCYSSDYFDKLYEYAIELIQKGLAYVDELTPE 128
           TNP KE++EYVE+IK+D+ WLG+ W  E  Y+SDYF +L+++AI LI++G AY+DE T E
Sbjct: 76  TNPTKEDVEYVEAIKEDIQWLGYQWGNEY-YASDYFQQLWDFAIRLIEEGKAYIDEQTAE 134

Query: 129 QIREYRGTLTEPGKHSPYRDRSVEENLALFEKMRAGEFAEGQACLRAKIDMASSFIVMRD 188
           QI + +GT T+ G +SPYRDR +EE+L LF+KM +GE  EG   LRAKIDM++  +  RD
Sbjct: 135 QIAQQKGTPTQAGVNSPYRDRPIEESLELFKKMNSGEIEEGAMVLRAKIDMSNPNMHFRD 194

Query: 189 PVLYRVRFAEHHQTGDKWCIYPMYDFTHCISDALEGITHSICTLEFQDNRRLYDWVLDNI 248
           P++YRV    HH+TG  W  YPMYDF H  SD  EG+THS+CTLEF  +R LYD  +D +
Sbjct: 195 PIIYRVVKHPHHRTGTTWKAYPMYDFAHGQSDFFEGVTHSLCTLEFVVHRPLYDLFIDWL 254

Query: 249 TI-----PCHPRQYEFSRLNLEYTVMSKRKLNQLVTEKLVTGWDDPRMPTISGLRRRGFT 303
                     PRQ EF++LNL YT+MSKR L  LV E LV GWDDPRMPTI G RRRG++
Sbjct: 255 KEGKDLNDNRPRQTEFNKLNLSYTLMSKRNLLTLVKEGLVNGWDDPRMPTICGFRRRGYS 314

Query: 304 PSAIREFCKRIGVTKQENMIEYSALESCIRDDLNENAPRAMAVLDPVKLVIENFAAGTVE 363
           P +I +F  +IG T  + + + + LES +RDDLN  A R  AV++PVKL+I N+  G VE
Sbjct: 315 PESIHKFIDKIGYTTYDALNDIALLESSVRDDLNSRATRISAVINPVKLIITNYPEGQVE 374

Query: 364 TLTLANHPNKPEMGDREVPFTRELWIEREDFREEANKKYKRLVLGKEVRLRGAYVIKAER 423
            L   N+P  PE G   + F+RELW+EREDF E+A KKY R+  G+EVRL+ AY++K   
Sbjct: 375 QLEAINNPEDPEAGSHMIEFSRELWMEREDFMEDAPKKYFRMTPGQEVRLKNAYIVKCTG 434

Query: 424 IEKDEQGNITTIFCSYDPETLGKNPADGRKVKGVIHWVSAEKGVPAEFRLYERLFTVPNP 483
            +KDE G IT ++C YD  T    P   RKVKG +HWVS    + AE RLY+RL+ V NP
Sbjct: 435 CKKDENGVITEVYCEYDANTRSGMPDANRKVKGTLHWVSCNHCLQAEVRLYDRLWKVENP 494

Query: 484 -------------GAADNFAETINPESLVKVQGYVEPSLVEAKPEFGY-QFERMGYFCAD 529
                         A +   E INP+SL  +            P   Y QF+R+GYF  D
Sbjct: 495 RDELAAIREAKKCEALEAMKEIINPDSLKVLPNCYIEKFAATLPVLSYLQFQRIGYFNID 554

Query: 530 NKDSSPQALVFNRTVGLRDSFAKIDE 555
            KDS+P+ LVFNRTVGL+D++ KI++
Sbjct: 555 -KDSTPEKLVFNRTVGLKDTWGKINK 579