Pairwise Alignments

Query, 556 a.a., glutamine--tRNA ligase from Vibrio cholerae E7946 ATCC 55056

Subject, 556 a.a., glutaminyl-tRNA synthetase (RefSeq) from Shewanella sp. ANA-3

 Score =  849 bits (2193), Expect = 0.0
 Identities = 407/551 (73%), Positives = 464/551 (84%), Gaps = 3/551 (0%)

Query: 3   EAEARPSNFIRQIIDKDLADGKHTTVHTRFPPEPNGYLHIGHAKSICLNFGIAQDYQGQC 62
           + E RPSNFIR IID+DL  GKHT+V TRFPPEPNGYLHIGHAKSICLNFGIA+DYQG C
Sbjct: 5   DTEVRPSNFIRNIIDEDLKSGKHTSVQTRFPPEPNGYLHIGHAKSICLNFGIARDYQGLC 64

Query: 63  NLRFDDTNPEKENLEYVESIKKDVTWLGFDWSGEVCYSSDYFDKLYEYAIELIQKGLAYV 122
           NLRFDDTNPEKE+++YV SI+ DV WLGF W GEV YSS+YFD+L++YA+ELI KGLAYV
Sbjct: 65  NLRFDDTNPEKEDIDYVNSIQADVRWLGFQWDGEVRYSSNYFDQLHQYAVELINKGLAYV 124

Query: 123 DELTPEQIREYRGTLTEPGKHSPYRDRSVEENLALFEKMRAGEFAEGQACLRAKIDMASS 182
             L  ++ REYRGTL EPGK+SPYRD SVEENL LFEKMR GEF EG+  LRAKIDMAS 
Sbjct: 125 CFLNADETREYRGTLKEPGKNSPYRDTSVEENLQLFEKMRKGEFKEGECALRAKIDMASP 184

Query: 183 FIVMRDPVLYRVRFAEHHQTGDKWCIYPMYDFTHCISDALEGITHSICTLEFQDNRRLYD 242
           F+ MRDPV+YR+RFA HHQTGDKWCIYPMYDFTHCISDALE ITHS+CTLEFQDNRRLYD
Sbjct: 185 FMCMRDPVIYRIRFAHHHQTGDKWCIYPMYDFTHCISDALEHITHSLCTLEFQDNRRLYD 244

Query: 243 WVLDNIT---IPCHPRQYEFSRLNLEYTVMSKRKLNQLVTEKLVTGWDDPRMPTISGLRR 299
           WVLDN+     P   RQYEFSRLNLEYT+MSKRKLN LVT KLV+GWDDPRMPTI+GLRR
Sbjct: 245 WVLDNLDDFQAPNRTRQYEFSRLNLEYTLMSKRKLNDLVTRKLVSGWDDPRMPTIAGLRR 304

Query: 300 RGFTPSAIREFCKRIGVTKQENMIEYSALESCIRDDLNENAPRAMAVLDPVKLVIENFAA 359
           RG+TP++IREFC+RIG+TKQENMIE + L++CIR++LNE+APRAMAVL P+K+VIEN+  
Sbjct: 305 RGYTPASIREFCQRIGITKQENMIEAAMLDACIREELNEHAPRAMAVLRPLKVVIENYPE 364

Query: 360 GTVETLTLANHPNKPEMGDREVPFTRELWIEREDFREEANKKYKRLVLGKEVRLRGAYVI 419
           G +ET+  A+HP+   MG RE+ F REL+I+  DFREEANK+YKRLV+GKEVRLR AYVI
Sbjct: 365 GQIETIQAASHPSDESMGTRELAFGRELYIDVADFREEANKQYKRLVMGKEVRLRNAYVI 424

Query: 420 KAERIEKDEQGNITTIFCSYDPETLGKNPADGRKVKGVIHWVSAEKGVPAEFRLYERLFT 479
           KAER +KD +GNITT++CSYD +TLGKNPADGRKVKGVIHWV A    PAEFRLY+RLFT
Sbjct: 425 KAERCDKDSEGNITTVYCSYDADTLGKNPADGRKVKGVIHWVEATTAKPAEFRLYQRLFT 484

Query: 480 VPNPGAADNFAETINPESLVKVQGYVEPSLVEAKPEFGYQFERMGYFCADNKDSSPQALV 539
            PNP AA+   E +NP SL  V G VE SLV A  E  YQFER GYFCADNKDSS + LV
Sbjct: 485 DPNPAAAETVDEVLNPNSLEVVNGLVEASLVNAPAEKAYQFEREGYFCADNKDSSAEHLV 544

Query: 540 FNRTVGLRDSF 550
           FN TV LRDSF
Sbjct: 545 FNLTVALRDSF 555