Pairwise Alignments

Query, 523 a.a., PTS N-acetylmuramic acid transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 485 a.a., PTS system, glucose-specific IIBC component (RefSeq) from Shewanella amazonensis SB2B

 Score =  235 bits (600), Expect = 2e-66
 Identities = 164/516 (31%), Positives = 254/516 (49%), Gaps = 85/516 (16%)

Query: 6   YAQKLGKALMLPIATLPVAALLLRLGQPDLLGIP-----FMAAAGDAIFSQLPLLFGLGI 60
           +AQ+L + L++PIA LP A +++ +    L  IP      M + G  IF  +P+LF + +
Sbjct: 22  FAQRLSQTLLIPIAILPAAGVMIGIATNPLPFIPDVANVLMLSVGKLIFDIMPMLFAIAV 81

Query: 61  AIGLSKDGSGAAGLAGAVAYFVL----SATAKTIDA---------SINMSFFGGIFAGII 107
           AIG  +D  G A  + A  Y VL    +A AK             +I+    GG+  G I
Sbjct: 82  AIGFCRD-QGIAAFSAAFGYGVLLSTLAAAAKVYHLPSHIVWGTPTIDTGIAGGMLVGGI 140

Query: 108 AGHSYNAFHTTRLPEWLAFFAGKRLVPIMAGLFALVAGALSGVIWPSIQGGLDALAH-AV 166
              +       RLP   +FF G+R  P++     ++   +   IWP +   ++ L+  AV
Sbjct: 141 TCVAVRLSEKLRLPAVFSFFEGRRSAPLIMIPLVMLLAVMLAFIWPPLALSIERLSDWAV 200

Query: 167 STSGALGQFVYGTLNRALIPVGLHHVLNSYFWFGMGTCQEILVSGAQAAGQALPALEKLC 226
               A+    YG + R L+P+GLHH+ N+ F+                            
Sbjct: 201 YQEPAIAFGFYGMVERLLLPLGLHHIWNAPFY---------------------------- 232

Query: 227 VDPALAKTLVVGQEHTFAFKNAVTPEITAVVKEVTEVVKSGDLHRFFGGDKSAGVFMNGF 286
                   L VGQ   +A                 E+V+ G++ R+F GD SAG    G+
Sbjct: 233 --------LEVGQ---YAHDG--------------EIVR-GEMARYFAGDPSAGNLAGGY 266

Query: 287 FPVMMFGLPGAALAMYLAAPAERRHQVGGALFSVAFCSFLTGITEPLEFMFVFLAPALYA 346
             + M+GLP AALA++  A   +R++V G + S A  S+LTG+TEP+EF F+F+AP LY 
Sbjct: 267 L-IKMWGLPAAALAIWRCADRNQRNRVAGVMLSAATASWLTGVTEPIEFAFLFVAPLLYL 325

Query: 347 MHAVFTGLSLVVANMFGTLHGFGFSAGLIDFLLNWGLATKPATLFVIGLAFFALYFFTFT 406
            HA+ TGL+  +A +    H   FS GL+DF+L +  ++    ++ +G   F +Y+  F 
Sbjct: 326 CHALLTGLAYSIAILLDMHHSVVFSHGLVDFVLLFPQSSNTHWIWFLGPLTFVIYYILFR 385

Query: 407 FAIRAFNLKSPGREDEEVETETDSADASKGDLARQYLKALGGHENLTSIDACITRLRLTL 466
            +I AFNLK+PGR +         AD  +       + ALGG  N+  + AC+TRLR+++
Sbjct: 386 ASILAFNLKTPGRFE---------ADTGQKRNLIAIVSALGGGGNIADLSACLTRLRISV 436

Query: 467 KDRSVADEAVLKKLGAKGVVKLGENNLQVILGPLAE 502
            D S  D   L  LGAKGV+ +G + +Q++ G  AE
Sbjct: 437 ADPSQVDRQRLMSLGAKGVIVVG-SGVQLVFGTKAE 471