Pairwise Alignments

Query, 523 a.a., PTS N-acetylmuramic acid transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 519 a.a., PTS transporter subunit IIBC from Klebsiella michiganensis M5al

 Score =  188 bits (477), Expect = 5e-52
 Identities = 161/546 (29%), Positives = 240/546 (43%), Gaps = 101/546 (18%)

Query: 3   ILGYAQKLGKALMLPIATLPVAALLLRLGQ----PDLLG-IPFMAAAGDAI-------FS 50
           IL   QK  +A++  +  LPV  L+L L      P L+    F+   G  +       F 
Sbjct: 8   ILENMQKFSRAMIGAVLFLPVIGLILALSSVLTNPTLISETSFLHQLGQLLGDTFWPLFG 67

Query: 51  QLPLLFGLGIAIGLSKDGSGAAGLAGAVAYFV-LSATAKTIDAS------INMSFFG--- 100
            L LLF +GI+ GL+KD      L   + + + L A    ++ +      IN  ++G   
Sbjct: 68  NLGLLFCVGISYGLAKDKKTEVALVSVMCFIMFLGANHSWLEHTHGLAEKINGEYYGTGQ 127

Query: 101 -----------GIFAGIIAGHS----YNAFHTTRLPEWLAFFAGKRLVPIMAGLFALVAG 145
                      G+F GII G +    +N   T  LP  L+ + G +L  +      +   
Sbjct: 128 TQLLGFVVVDMGVFLGIILGCTIAWVHNKVSTIELPGALSMYGGAKLTLVAMTPVVIFYA 187

Query: 146 ALSGVIWPSIQGGLDALAHAVSTSGALGQFVYGTLNRALIPVGLHHVLNSYFWF----GM 201
                 WP +  G+ AL   +  +G  G FVYG   + LIP GLHH + S F      G 
Sbjct: 188 IAFTWFWPFMTHGIAALTGFMKNAGVAGVFVYGFFEKFLIPTGLHHFVWSPFQLTQIGGT 247

Query: 202 GTCQEILVSGAQAAGQALPALEKLCVDPALAKTLVVGQEHTFAFKNAVTPEITAVVKEVT 261
            +    +VSG QA   A                      H         P++T V+ E  
Sbjct: 248 LSVDGQVVSGTQAIFLAY-------------------MRH---------PDLTPVMNEAL 279

Query: 262 EVVKSGDLHRFFGGDKSAGVFMNGFFPVMMFGLPGAALAMYLAAPAERRHQVGGALFSVA 321
              + G                       +FGL GA+LA Y  A  E++      L    
Sbjct: 280 RFSQQG--------------------MTTIFGLAGASLAFYHTAKPEKKMMAKAILLPAI 319

Query: 322 FCSFLTGITEPLEFMFVFLAPALYAMHAVFTGLSLVVANMFGTLHGFGFSAGLIDFLL-N 380
             S LTGITEP+EF F+F++P L+ +HA  T  S  + ++F T+  +G ++GLI+FL+ N
Sbjct: 320 ITSMLTGITEPIEFTFLFVSPLLWVIHATLTAASQAICDIF-TVRPWG-ASGLIEFLIYN 377

Query: 381 WGL---ATKPATLFVIGLAFFALYFFTFTFAIRAFNLKSPGREDEEVETETDSADASK-- 435
             L    T+     +IG+  FA+Y+  F   +   NLK+PGRED+E       AD  K  
Sbjct: 378 LPLPVSLTRWPGYVLIGIGQFAVYYVIFRTLVVKLNLKTPGREDDENVKLYSKADYRKKM 437

Query: 436 ---GDLARQYLKALGGHENLTSIDACITRLRLTLKDRSVADEAVLKKLGAKGVVKLGENN 492
                +  + +  LGG EN+ S+D C TRLR+ + +  + D+ +LK  GA GVV+   N 
Sbjct: 438 GEPQSVTNEIINGLGGKENIISVDNCFTRLRVAIHNMDLVDDTILKSTGANGVVR-NRNE 496

Query: 493 LQVILG 498
           +QVI G
Sbjct: 497 VQVIYG 502