Pairwise Alignments

Query, 523 a.a., PTS N-acetylmuramic acid transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 530 a.a., bifunctional PTS system maltose and glucose-specific transporter subunits IICB from Klebsiella michiganensis M5al

 Score =  263 bits (673), Expect = 9e-75
 Identities = 190/559 (33%), Positives = 263/559 (47%), Gaps = 101/559 (18%)

Query: 6   YAQKLGKALMLPIATLPVAALLLRLGQP----------DLLGIPFMAAA-------GDAI 48
           + Q+LGK  MLP+A L    ++L +G              L +P + A        G   
Sbjct: 14  FFQQLGKTFMLPVALLSFCGIMLGIGSSLSSHDVLTLLPWLDVPLLQAVFIWMGKVGSFA 73

Query: 49  FSQLPLLFGLGIAIGLSKDGSGAAGLAGAVAYFVLSA------TAK----TIDA------ 92
           FS LP++F + I +GL+++  G A  AG V Y V++       TAK    T DA      
Sbjct: 74  FSFLPVMFCIAIPLGLARENKGVAAFAGFVGYAVMNLAVNFWLTAKGILPTTDAAVLKAN 133

Query: 93  ---------SINMSFFGGIFAGIIAGHSYNAFHTTRLPEWLAFFAGKRLVPIMAGLFALV 143
                    SI+    G + AGII    +  FH  RLP+ LAFF G R VPI+  +   +
Sbjct: 134 NIQNIIGIQSIDTGILGAVIAGIIVWMLHERFHNIRLPDALAFFGGTRFVPIITTVVLGL 193

Query: 144 AGALSGVIWPSIQGGLDALAHAVSTSGALGQFVYGTLNRALIPVGLHHVLNSYFWFG--- 200
            G +  +IWP    G++AL   ++++G  G  ++GT  R L+P GLHH+L +   F    
Sbjct: 194 VGLVIPLIWPVFAMGINALGQVINSAGDFGPMIFGTGERLLLPFGLHHILVALIRFTEAG 253

Query: 201 --MGTCQEILVSGAQAAGQALPALEKLCVDPALAKTLVVGQEHTFAFKNAVTPEITAVVK 258
             M  C    VSGA    QA                L     H F+             +
Sbjct: 254 GTMDVCGHS-VSGALTIFQA---------------QLSCPTTHGFS-------------E 284

Query: 259 EVTEVVKSGDLHRFFGGDKSAGVFMNGFFPVMMFGLPGAALAMYLAAPAERRHQVGGALF 318
             T  +  G +  F GG                  LPGAALAMY  A  E RH++ G L 
Sbjct: 285 SATRFLSQGKMPAFLGG------------------LPGAALAMYHCARPENRHKIKGLLI 326

Query: 319 SVAFCSFLTGITEPLEFMFVFLAPALYAMHAVFTGLSLVVANMFGTLHGFGFSAGLIDFL 378
           S      + G TEPLEF+F+F+AP LY +HA+ TGL   +  + G   G      +IDF+
Sbjct: 327 SGVIACVVGGTTEPLEFLFLFVAPVLYVIHALLTGLGFTMMAILGVTIG-NTDGNVIDFV 385

Query: 379 ---LNWGLATKPATLFVIGLAFFALYFFTFTFAIRAFNLKSPGREDE---EVETETDSAD 432
              +  GL+TK   + V+   +FA+Y+  F FAI  FNLK+PGR+ E     E       
Sbjct: 386 VFGILHGLSTKWYLVPVVAAIWFAVYYGIFRFAITRFNLKTPGRDIETNSAFEKAVTGVT 445

Query: 433 ASKGDLARQYLKALGGHENLTSIDACITRLRLTLKDRSVADEAVLKKLGAKGVVKLGENN 492
              G      L ALGG EN+ S+D CITRLRL++ D S  D A LK   A GVV+L ++N
Sbjct: 446 GKSGYNVPAILAALGGAENIVSLDNCITRLRLSVNDMSKVDSAALKANRAIGVVQLNQHN 505

Query: 493 LQVILGPLAEIVAGEMKAI 511
           LQV++GP  + V  EM  +
Sbjct: 506 LQVVIGPQVQSVKDEMAVL 524