Pairwise Alignments

Query, 523 a.a., PTS N-acetylmuramic acid transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 650 a.a., PTS N-acetyl glucosamine transporter subunit IIABC from Klebsiella michiganensis M5al

 Score =  461 bits (1186), Expect = e-134
 Identities = 253/518 (48%), Positives = 325/518 (62%), Gaps = 60/518 (11%)

Query: 1   MNILGYAQKLGKALMLPIATLPVAALLLRLGQPDLLGIPFMAAAGDAIFSQLPLLFGLGI 60
           MNILG+ Q+LG+AL LPIA LPVAALLLR GQPDLL I F+A AG AIF  L L+F +G+
Sbjct: 1   MNILGFFQRLGRALQLPIAVLPVAALLLRFGQPDLLNISFIAQAGGAIFDNLALIFAIGV 60

Query: 61  AIGLSKDGSGAAGLAGAVAYFVLSATAKTIDASINMSFFGGIFAGIIAGHSYNAFHTTRL 120
           A   SKD +GAA LAGAV YFVL+    TI+ +INM    GI  G++ G  YN +   +L
Sbjct: 61  ASSWSKDSAGAAALAGAVGYFVLTKAMVTINPAINMGVLAGIITGLVGGAVYNRWSGIKL 120

Query: 121 PEWLAFFAGKRLVPIMAGLFALVAGALSGVIWPSIQGGLDALAHAVSTSGALGQFVYGTL 180
           P++L+FF GKR VPI  G F LV  A+ G +WP +Q  + A    +  +GALG  ++G +
Sbjct: 121 PDFLSFFGGKRFVPIATGFFCLVLAAIFGYVWPPVQNAIHAGGEWIVGAGALGSGIFGFI 180

Query: 181 NRALIPVGLHHVLNSYFWFGMGTCQEILVSGAQAAGQALPALEKLCVDPALAKTLVVGQE 240
           NR LIP GLH VLN+  WF +G                                      
Sbjct: 181 NRLLIPTGLHQVLNTIAWFQIGE------------------------------------- 203

Query: 241 HTFAFKNAVTPEITAVVKEVTEVVKSGDLHRFFGGDKSAGVFMNGFFPVMMFGLPGAALA 300
               F NA               V  GD++RF+ GD +AG+FM+GFFP+MMFGLPGAALA
Sbjct: 204 ----FTNAAG------------AVFHGDINRFYAGDGTAGMFMSGFFPIMMFGLPGAALA 247

Query: 301 MYLAAPAERRHQVGGALFSVAFCSFLTGITEPLEFMFVFLAPALYAMHAVFTGLSLVVAN 360
           MY AAP ERR  VGG L SVA  +FLTG+TEPLEF+F+FLAP LY +HA+ TG+SL VA 
Sbjct: 248 MYFAAPKERRPMVGGMLLSVAITAFLTGVTEPLEFLFMFLAPLLYLLHAILTGISLFVAT 307

Query: 361 MFGTLHGFGFSAGLIDFLLNWGL--ATKPA-TLFVIGLAFFALYFFTFTFAIRAFNLKSP 417
             G   GF FSAG ID++L + L  A+K    L V+G+ FF +YF  F+  IR FNLK+P
Sbjct: 308 ALGIHAGFSFSAGAIDYVLMYSLPAASKNVWMLIVMGVVFFVIYFLLFSAVIRMFNLKTP 367

Query: 418 GRED--EEVETETDSADASKG--DLARQYLKALGGHENLTSIDACITRLRLTLKDRSVAD 473
           GRED  ++V TE  +++  +G   LA  Y+ A+GG +NL +IDACITRLRLT+ D ++ +
Sbjct: 368 GREDKVDDVVTEEANSNTEEGLTQLATNYIAAVGGTDNLKAIDACITRLRLTVADSALVN 427

Query: 474 EAVLKKLGAKGVVKLGENNLQVILGPLAEIVAGEMKAI 511
           +A  K+LGA GVVKL +  +QVI+G  AE V  EMK +
Sbjct: 428 DAACKRLGASGVVKLNKQTIQVIVGAKAESVGDEMKKV 465