Pairwise Alignments

Query, 523 a.a., PTS N-acetylmuramic acid transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 599 a.a., PTS system N-acetylglucosamine-specific IIB component, Glc family /PTS system N-acetylglucosamine-specific IIC component, Glc family from Paraburkholderia bryophila 376MFSha3.1

 Score =  446 bits (1146), Expect = e-129
 Identities = 239/511 (46%), Positives = 310/511 (60%), Gaps = 62/511 (12%)

Query: 8   QKLGKALMLPIATLPVAALLLRLGQPDLLGIPFMAAAGDAIFSQLPLLFGLGIAIGLSKD 67
           Q+LG+ALMLPIA LPVA LLLRLGQPD+  I  +A AG AIF  LPLLF +G+A+G +KD
Sbjct: 10  QRLGRALMLPIAVLPVAGLLLRLGQPDVFNIKMIADAGGAIFDNLPLLFAIGVAVGFAKD 69

Query: 68  GSGAAGLAGAVAYFVLSATAKTIDASINMSFFGGIFAGIIAGHSYNAFHTTRLPEWLAFF 127
            +G AGLAGA+ Y +  A  K I+  +NM    GI AGI+AG  YN +   +LP++LAFF
Sbjct: 70  NNGVAGLAGAIGYLIEVAVMKDINDKLNMGVLSGIVAGIVAGLLYNRYKDIKLPDYLAFF 129

Query: 128 AGKRLVPIMAGLFALVAGALSGVIWPSIQGGLDALAHAVSTSGALGQFVYGTLNRALIPV 187
            GKR VPI+ G+  L  G L G +W  +Q  +D   H ++T+GALG FV+G LNR L+  
Sbjct: 130 GGKRFVPIVTGVVCLALGILFGYVWQPVQSVIDTAGHWLTTAGALGAFVFGVLNRLLLVT 189

Query: 188 GLHHVLNSYFWFGMGTCQEILVSGAQAAGQALPALEKLCVDPALAKTLVVGQEHTFAFKN 247
           GLHH+LNS  WF  GT                                            
Sbjct: 190 GLHHILNSLTWFVFGT-------------------------------------------- 205

Query: 248 AVTPEITAVVKEVTEVVKSGDLHRFFGGDKSAGVFMNGFFPVMMFGLPGAALAMYLAAPA 307
             TP   A V        +GDLHRFF GD +AG FM GFFPVMMFGLP A LAM+  AP 
Sbjct: 206 -FTPPGGAAV--------TGDLHRFFAGDPTAGTFMTGFFPVMMFGLPAACLAMFHEAPK 256

Query: 308 ERRHQVGGALFSVAFCSFLTGITEPLEFMFVFLAPALYAMHAVFTGLSLVVANMFGTLHG 367
           ERR  VGG LFS+A  SFLTG+TEP+EF F+FLAP LY +HA+ TGL+L + +  G   G
Sbjct: 257 ERRAIVGGLLFSMALTSFLTGVTEPIEFSFMFLAPVLYVIHALLTGLALAICSALGIHLG 316

Query: 368 FGFSAGLIDFLLNWGLATKPATLFVIGLAFFALYFFTFTFAIRAFNLKSPGREDEEVETE 427
           F FSAG ID++LN+GL+TK      +G+ +  +Y+  F F IR FN+ +PGRE    + +
Sbjct: 317 FTFSAGAIDYVLNYGLSTKGWLAIPVGIVYAVVYYGLFRFFIRKFNMATPGREPAAADEQ 376

Query: 428 TDSADA---------SKGDLARQYLKALGGHENLTSIDACITRLRLTLKDRSVADEAVLK 478
            DS  A         +    A++Y+ ALGG  NL+ +DAC TRLRL++ D     E  LK
Sbjct: 377 VDSFAAGGFVSPVAGAAVPRAQRYIAALGGAANLSVVDACTTRLRLSVVDSGKVSENELK 436

Query: 479 KLGAKGVVKLGENNLQVILGPLAEIVAGEMK 509
            +GA+GV+K G  N+QVI+GP A+I+A E++
Sbjct: 437 TIGARGVLKRGATNVQVIIGPEADIIADEIR 467