Pairwise Alignments

Query, 523 a.a., PTS N-acetylmuramic acid transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 512 a.a., PTS N-acetylglucosamine transporter subunit IIABC from Bifidobacterium breve UCC2003

 Score =  295 bits (756), Expect = 2e-84
 Identities = 188/548 (34%), Positives = 272/548 (49%), Gaps = 84/548 (15%)

Query: 6   YAQKLGKALMLPIATLPVAALLLRLG---QPDLLG-----IPFMAAAGDAIFSQLPLLFG 57
           Y Q+LG+ALMLP+A LP AAL L +G    P   G       ++   G AI   L LLF 
Sbjct: 4   YIQRLGRALMLPVACLPAAALFLGIGYWIDPSGWGGGNVIAAYLCKTGSAILDNLGLLFA 63

Query: 58  LGIAIGLSKDGSGAAGLAGAVAYFVLSATAKTIDASI-----------------NMSFFG 100
           +G+A+G+++D  GA+ L+G V +  ++    +    +                 N + F 
Sbjct: 64  VGVAVGMARDKDGASALSGLVGFMTITTIMGSASMFLGFDAENPPAAFAPGAIGNKNVFF 123

Query: 101 GIFAGIIAGHSYNAFHTTRLPEWLAFFAGKRLVPIMAGLFALVAGALSGVIWPSIQGGLD 160
           GI  G ++G  YN F  T+LP++LAFF+G+R VPI+      V   +   +WP +  GL 
Sbjct: 124 GIMVGCVSGALYNRFSKTKLPDFLAFFSGRRCVPILTAALMSVISLVLLFVWPLVYNGLV 183

Query: 161 ALAHAVSTSGALGQFVYGTLNRALIPVGLHHVLNSYFWFGMGTCQEILVSGAQAAGQALP 220
           A   ++   GA+G  +Y   NR LIP GLHH LN+ FWF +    +I        G    
Sbjct: 184 AFGESLMGMGAVGAGIYAFFNRLLIPTGLHHALNNVFWFNLAGIDDITKFWNGVGGL--- 240

Query: 221 ALEKLCVDPALAKTLVVGQEHTFAFKNAVTPEITAVVKEVTEVVKSGDLHRFFGGDKSAG 280
                                     N  T  + A          +G    +  G+   G
Sbjct: 241 --------------------------NGTTKAVLA----------TGGFQPW--GEYVTG 262

Query: 281 VFMNGFFPVMMFGLPGAALAMYLAAPAERRHQVGGALFSVAFCSFLTGITEPLEFMFVFL 340
           ++  GFFP+MMFGLP  A A+Y  A  E R  VG  + +    +FLTG+TEPLEF F+F 
Sbjct: 263 MYQAGFFPIMMFGLPAGAFAIYRCAKPENRRTVGSLMLAGGLAAFLTGVTEPLEFSFMFA 322

Query: 341 APALYAMHAVFTGLSLVVANMFGTLHGFGFSAGLIDFLLNWGL--ATKPATLFVIGLAFF 398
           A  LY +HA+ T LS+ +A  F  + GF FSAG ID+ L+  +  A  P  L V GL F 
Sbjct: 323 AFPLYVVHALLTALSVFIAASFQWIAGFNFSAGFIDWFLSLRVPQAHMPWMLIVQGLVFA 382

Query: 399 ALYFFTFTFAIRAFNLKSPGR----EDEEVET-----ETDSADASK------GDLARQYL 443
            +Y+F FTF I+ F+LK+PGR    +DE         +T +A A+         LA +  
Sbjct: 383 VIYYFVFTFMIKKFDLKTPGRGDGVDDEGAAAVAGILDTGAAPAAAVSRDKYAALAAKLY 442

Query: 444 KALGGHENLTSIDACITRLRLTLKDRSVADEAVLKKLGAKGVVKLGENNLQVILGPLAEI 503
             LGG  N+  I+ C+TRLRL +KD +  D   ++KL   GV  + + N+QV++G   + 
Sbjct: 443 ALLGGKANIVDIENCVTRLRLGVKDTAKVDVDAIRKL-VPGVKVIDDRNVQVVVGTQVQA 501

Query: 504 VAGEMKAI 511
           VA  M+ +
Sbjct: 502 VADAMEEL 509