Pairwise Alignments

Query, 523 a.a., PTS N-acetylmuramic acid transporter subunit IIBC from Vibrio cholerae E7946 ATCC 55056

Subject, 452 a.a., PTS system, glucose-like IIB subunint (RefSeq) from Shewanella sp. ANA-3

 Score =  216 bits (550), Expect = 1e-60
 Identities = 155/502 (30%), Positives = 243/502 (48%), Gaps = 84/502 (16%)

Query: 21  LPVAALLLRLG------QPDLLGIPFMAAAGDAIFSQLPLLFGLGIAIGLSKDGSGAAGL 74
           +P A ++L L        P++L +  M A G  IF+ +P+LF + +AIG  +D  G A  
Sbjct: 1   MPAAGVMLGLTVSPIPFMPEVLTV-LMLAVGKLIFAIMPILFAVAVAIGFCRD-QGIAAF 58

Query: 75  AGAVAYFVLSATAKTID-------------ASINMSFFGGIFAGIIAGHSYNAFHTTRLP 121
                Y V++AT   +               +++    GG+  G +   +       RLP
Sbjct: 59  TAVFGYGVMTATLAALADLYQLPTQLLLGMETLDTGIAGGMLIGGVTCFAVRWSQYIRLP 118

Query: 122 EWLAFFAGKRLVPIMAGLFALVAGALSGVIWPSIQGGLDALAH-AVSTSGALGQFVYGTL 180
              +FF G+R   ++    A+  G +   +WP +   ++ ++  AV    A+   VYG L
Sbjct: 119 AIFSFFEGRRSASLLIIPLAMGLGYILAHVWPPLSLLIERVSDWAVYQKPAIAFGVYGAL 178

Query: 181 NRALIPVGLHHVLNSYFWFGMGTCQEILVSGAQAAGQALPALEKLCVDPALAKTLVVGQE 240
            R LIP+GLHH+ N+ F+                                    L VGQ 
Sbjct: 179 ERLLIPLGLHHIWNAPFY------------------------------------LEVGQ- 201

Query: 241 HTFAFKNAVTPEITAVVKEVTEVVKSGDLHRFFGGDKSAGVFMNGFFPVMMFGLPGAALA 300
             +  +N+             EVV+ G++ R+  GD  AG    G+  + M+GLP AALA
Sbjct: 202 --YQLQNS-------------EVVR-GEVARYLAGDPQAGNLAGGYL-IKMWGLPAAALA 244

Query: 301 MYLAAPAERRHQVGGALFSVAFCSFLTGITEPLEFMFVFLAPALYAMHAVFTGLSLVVAN 360
           ++  A    R++V G + S A  S+LTG+TEP+EF F+F+AP L+ +H + +GL+  V  
Sbjct: 245 IWRCAEPSERNRVAGIMLSAAAASWLTGVTEPIEFAFMFVAPFLFLIHVLLSGLAYFVCI 304

Query: 361 MFGTLHGFGFSAGLIDFLLNWGLATKPATLFVIGLAFFALYFFTFTFAIRAFNLKSPGRE 420
           M    H   FS GL+DF L + L+        +G     +Y+  F  +I AFNLK+PGR 
Sbjct: 305 MLDIHHSIVFSHGLVDFTLLFSLSRNTGWFVFLGPLTAVIYYLLFRGSILAFNLKTPGR- 363

Query: 421 DEEVETETDSADASKGDLARQYLKALGGHENLTSIDACITRLRLTLKDRSVADEAVLKKL 480
                 E D    +K  L R  + ALGG EN+  ++AC+TRLRL++    + ++  L +L
Sbjct: 364 -----LEPDEPHGAKESL-RAIIAALGGRENIVELNACLTRLRLSVHSPELVNKVRLSQL 417

Query: 481 GAKGVVKLGENNLQVILGPLAE 502
           GAKGV+ +G+  +QV+ G  AE
Sbjct: 418 GAKGVIVMGK-GVQVVYGTKAE 438