Pairwise Alignments

Query, 404 a.a., N-acetylglucosamine repressor from Vibrio cholerae E7946 ATCC 55056

Subject, 401 a.a., transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  107 bits (268), Expect = 5e-28
 Identities = 87/365 (23%), Positives = 165/365 (45%), Gaps = 33/365 (9%)

Query: 10  DLVKQLNSAAVYRLIDQQGPISRIQVADVSQLAPASVTKITRQLLERGLI----KEVAQQ 65
           +L++ +N   V   I + GPISR+++++ ++L+  +V+ IT  LL+ GLI    +   + 
Sbjct: 7   ELMRAINRFNVLDTIRRHGPISRVEISERTELSTTTVSAITASLLDDGLILTRHEGDIRN 66

Query: 66  ASTGGRRAISLTTEVKPFHSIAVRIGRDYIQLSLYDLGGNSLVDEHHEFHYNTQDV-LMS 124
           A+  GR  + L  + +    +  +I  + +  ++ +  G  L D       + Q + +++
Sbjct: 67  AAARGRPRVMLELDPEAARVVGAKIAANRMVFAVTNFRGEVLSDLTLPIRVDRQPIAVIA 126

Query: 125 SLIKQ-IKQFIQQHTALIDQLIAIGVALPGLVNPETGVVEYMPNVAINELPLGATIRDEF 183
            LI+  +++ +      +D + +I + LPG+V   TG V   P     ++   + +    
Sbjct: 127 DLIEDGVRRCVVDADLSLDDIDSICIGLPGVVEHRTGHVRSSPIFRETDVDFASEMTSRL 186

Query: 184 HVECFVGNDVRGIALAEHYFGASQDCQDSILVSVHRGTGAGIIVNGQVFLGYNRNVGEIG 243
           +V   V +D   I LA H+FG ++D  D +LVS+ +  G G++  GQ+F    R  G + 
Sbjct: 187 NVATIVESDAHAITLAHHWFGRARDLDDMVLVSLEQTLGLGVLHGGQLF----RGAGGLS 242

Query: 244 HIQIDPLGEQCQCGNFGCLETVATNPAITSRVQKLIAQGYESSLSTLD-----TITIDDV 298
           H             N G L  +    + T R+  L  +        +D      + +   
Sbjct: 243 H-------------NLGDL-VLGVGESRTVRLSTLAGENAILGEHPMDGRFAEAVRLGRG 288

Query: 299 CEHAN----AGDELAKQALVRVGNQLGKAIAITVNLFNPQKIVIAGQITAAKEIVFPAIQ 354
             HA     A D+       R G  +G A+A  V LF P ++VI G   +   +   +I+
Sbjct: 289 MTHAQTLIAAEDDALIATASRAGEAIGLAVANIVTLFGPPRVVIVGSSLSLGTVFVESIR 348

Query: 355 RNVEN 359
           R+ +N
Sbjct: 349 RSFQN 353