Pairwise Alignments

Query, 404 a.a., N-acetylglucosamine repressor from Vibrio cholerae E7946 ATCC 55056

Subject, 408 a.a., ROK family transcriptional regulator from Sinorhizobium meliloti 1021

 Score =  121 bits (303), Expect = 4e-32
 Identities = 82/388 (21%), Positives = 172/388 (44%), Gaps = 11/388 (2%)

Query: 7   GNVDLVKQLNSAAVYRLIDQQGPISRIQVADVSQLAPASVTKITRQLLERGLIKEVAQQA 66
           G+    + +N   +  L+ ++G  SR ++A  + L+PA+VT +   L+E GL+ E    A
Sbjct: 24  GDQSTTRAMNRRLILNLLRREGAKSRAEIAAATGLSPAAVTFVVSDLIEEGLLIEGQSVA 83

Query: 67  STGGRRAISLTTEVKPFHSIAVRIGRDYIQLSLYDLGGNSLVDEHHEFHYNTQDVLMSSL 126
              GRR I +  +     ++  ++    ++  + DL    L         +  D +  +L
Sbjct: 84  GAQGRRPIPVAIDYAGGVALGFKLMAGSVECVVTDLETTPLASLRLPLPAHDPDTIAEAL 143

Query: 127 IKQIKQFIQQHTALIDQLIAIGVALPGLVNPETGVVEYMPNVAINELPLGATIRDEFHVE 186
                + +        +L  IG+A+PG+++ +  V         + +PLG  +     V 
Sbjct: 144 AAAAPKLVALANRPAARLAGIGIAMPGVIDNQRAVCIRSNRYGWDNVPLGDLVASRIGVP 203

Query: 187 CFVGNDVRGIALAEHYFGASQDCQDSILVSVHRGTGAGIIVNGQVFLGYNRNVGEIGHIQ 246
            ++ +D    A+A+  FG  +  +   ++++  G    ++++G+++ G +   G+ GH  
Sbjct: 204 VWLEDDTNAYAIAQQLFGLGRHYKTMGVLAIGVGVACSLVLDGKLYRGAHGAAGKFGHFP 263

Query: 247 IDPLGEQCQCGNFGCLETVATNPAITSRVQKLIAQGYESSLSTLDTITIDDVCEHANAGD 306
               G  C+CG  GCL +  + PA        + Q +       +T    ++     AGD
Sbjct: 264 HMEGGRPCECGKRGCLMSYFSEPA--------MLQTWHERSGRPETDGRAEMVAAIAAGD 315

Query: 307 ELAKQALVRVGNQLGKAIAITVNLFNPQKIVIAGQITAAKEIVFPAIQRNVENQSLKTFH 366
           + A   +   G  LG+ +A  +N+ +P+ IV+ G+  A  + +F  ++  +E  +   F 
Sbjct: 316 KAAHSVMREAGETLGRHLAGLMNVIDPEVIVVGGEAVAYGDALFGPLRATLERFA---FR 372

Query: 367 QHLPIVSSQVYKQPTMGAFAMIKRAMLN 394
           Q  P++          GA A++ + + +
Sbjct: 373 QAPPVLLDWEDDSWARGAAALVTQKLFD 400