Pairwise Alignments

Query, 404 a.a., N-acetylglucosamine repressor from Vibrio cholerae E7946 ATCC 55056

Subject, 407 a.a., ROK family protein from Rahnella sp. WP5

 Score =  497 bits (1280), Expect = e-145
 Identities = 250/400 (62%), Positives = 313/400 (78%), Gaps = 1/400 (0%)

Query: 5   QIGNVDLVKQLNSAAVYRLIDQQGPISRIQVADVSQLAPASVTKITRQLLERGLIKEVAQ 64
           QIGNVDLVKQLN AAVYRLIDQQGPISRIQ+AD+SQLAPASVTKITRQLLERGLIKEV Q
Sbjct: 9   QIGNVDLVKQLNGAAVYRLIDQQGPISRIQIADMSQLAPASVTKITRQLLERGLIKEVDQ 68

Query: 65  QASTGGRRAISLTTEVKPFHSIAVRIGRDYIQLSLYDLGGNSLVDEHHEFHYNTQDVLMS 124
           QASTGGRRAIS+ TE +PFH+IAVR+GR    ++LYDL   SL ++H+     TQ+ L +
Sbjct: 69  QASTGGRRAISIITETRPFHTIAVRLGRHDATITLYDLSAKSLAEQHYALPERTQETLEN 128

Query: 125 SLIKQIKQFIQQHTALIDQLIAIGVALPGLVNPETGVVEYMPNVAINELPLGATIRDEFH 184
           +L + I+QFI+ +   I +LIAI V LPGLV+P  G+V YMP++++    L   +   F 
Sbjct: 129 ALFEAIQQFIELNQRKIRELIAISVILPGLVDPNKGIVRYMPHISVGAWKLVDALEARFK 188

Query: 185 VECFVGNDVRGIALAEHYFGASQDCQDSILVSVHRGTGAGIIVNGQVFLGYNRNVGEIGH 244
           V  FVG+D+R +ALAEHYFGA++DCQDSILV +HRGTGAGIIVNGQ+FLG N NVGEIGH
Sbjct: 189 VTSFVGHDIRSLALAEHYFGATRDCQDSILVRLHRGTGAGIIVNGQIFLGSNGNVGEIGH 248

Query: 245 IQIDPLGEQCQCGNFGCLETVATNPAITSRVQKLIAQGYESSLSTLDTITIDDVCEHANA 304
           IQIDPLGE+C CGNFGCLETVA N AI +RV+ L+ QGY S LS L+  +I  +C+ AN 
Sbjct: 249 IQIDPLGERCHCGNFGCLETVAANAAIENRVRHLLTQGYASKLS-LNDCSISAICKAANR 307

Query: 305 GDELAKQALVRVGNQLGKAIAITVNLFNPQKIVIAGQITAAKEIVFPAIQRNVENQSLKT 364
            D LA + +  VG QLGK ++I +NLFNPQK+VIAG+IT A +++ PAIQ  +  Q LK 
Sbjct: 308 HDPLATEVIEHVGRQLGKGVSIAINLFNPQKVVIAGEITEADKVLLPAIQNCINAQVLKD 367

Query: 365 FHQHLPIVSSQVYKQPTMGAFAMIKRAMLNGVLLQKLLED 404
           F ++LP+V+S +  Q  +GAFA++KRAMLNGVLLQ+L+E+
Sbjct: 368 FRRNLPVVTSALNHQSAIGAFALVKRAMLNGVLLQRLMEN 407