Pairwise Alignments

Query, 404 a.a., N-acetylglucosamine repressor from Vibrio cholerae E7946 ATCC 55056

Subject, 404 a.a., ROK family transcriptional regulator from Parabacteroides merdae CL09T00C40

 Score =  133 bits (334), Expect = 1e-35
 Identities = 93/376 (24%), Positives = 179/376 (47%), Gaps = 20/376 (5%)

Query: 35  VADVSQ---LAPASVTKITRQLLERGLIKEVAQQASTGGRRAISLTTEVKPFHSIAVRIG 91
           +AD+ +   L+  +VTK+  +L + G I +  +Q + GGR+           + + V + 
Sbjct: 34  IADLGREMDLSIPTVTKLVAELQDDGYILDFGKQETNGGRKPNIYGLNPASGYFVGVDML 93

Query: 92  RDYIQLSLYDLGGNSL-VDEHHEFHYNTQDVLMSSLIKQIKQFIQQHTALIDQLIAIGVA 150
           +D + ++  D  G+ + ++E+  +        +    K I  FI       ++++AIGV 
Sbjct: 94  KDKLNIAAIDFKGDKVQLEENIPYQLENTPASLEQFCKIIDDFIVSLPVERNKILAIGVN 153

Query: 151 LPGLVNPETGVVEYMPNVA-INELPLGATIRDEFHVECFVGNDVRGIALAEHYFGASQDC 209
           + G VNP +G   Y  ++    E PL   + +    + F+ ND R +   E+  G  Q  
Sbjct: 154 ITGRVNPASG---YSYSIFYFEEKPLAQILEERLQTKVFIENDSRAMTYGEYMKGVVQGE 210

Query: 210 QDSILVSVHRGTGAGIIVNGQVFLGYNRNVGEIGHIQIDPLGEQCQCGNFGCLETVATNP 269
           ++ + V++  G G GII++G ++ G +   GE GH  +      C CG  GCLET A+  
Sbjct: 211 KNILFVNMAWGLGLGIIIDGNLYYGKSGFSGEFGHFCMFENEVLCHCGKKGCLETEASGS 270

Query: 270 AITSRVQKLIAQGYESSLSTL--------DTITIDDVCEHANAGDELAKQALVRVGNQLG 321
           A      +++ + Y    +T+        + I++ D+ E     D L    L ++G  LG
Sbjct: 271 AF----HRILIERYREGSNTILAGKLDSGEEISLGDLLEAVRKEDVLCIDILEKMGVNLG 326

Query: 322 KAIAITVNLFNPQKIVIAGQITAAKEIVFPAIQRNVENQSLKTFHQHLPIVSSQVYKQPT 381
           K IA  +N+FNP+ +++ G ++ A E +   ++  +   SL   +Q   I  S++ ++  
Sbjct: 327 KGIAGLMNIFNPELVILGGTLSLAGEYISLPVKSAIRKYSLNLVNQDTEIKISKLGERAG 386

Query: 382 MGAFAMIKRAMLNGVL 397
                ++ R+ L G++
Sbjct: 387 AFGACLLSRSKLLGMI 402