Pairwise Alignments

Query, 404 a.a., N-acetylglucosamine repressor from Vibrio cholerae E7946 ATCC 55056

Subject, 389 a.a., ROK family transcriptional regulator from Pantoea sp. MT58

 Score = 97.1 bits (240), Expect = 8e-25
 Identities = 67/262 (25%), Positives = 120/262 (45%), Gaps = 11/262 (4%)

Query: 8   NVDLVKQLNSAAVYRLIDQQGPISRIQVADVSQLAPASVTKITRQLLERGLIKEVAQQAS 67
           N++  +  N   V   I   G ++R ++A ++ L P +V+ I  +L +  L+     + S
Sbjct: 7   NLEHARAHNRRVVIEAIRLHGELTRAELARMTALTPQTVSNIVAELEQAELLTSRQPRRS 66

Query: 68  TGGRRAISLTTEVKPFHSIAVRIGRDYIQLSLYDLGGNSLVDEHHEFHYNTQDVLMSSLI 127
             G+ +I +T       SI + +    + L L DL G    + H       Q    ++ +
Sbjct: 67  GRGQPSIPVTLNPTSAWSIGIHLDHQTLLLVLVDLSG----EVHFRRLLMVQKPQPAATL 122

Query: 128 KQIKQFIQQHTALI----DQLIAIGVALPGLVNPETGVVEYMPNV--AINELPLGATIRD 181
             I   +++  A +     +++ IGV +PG    E G+    P       ++ + A +  
Sbjct: 123 ACIASVLEEMRAFLGTQWQKVLGIGVVMPGPFGVE-GISSTGPTTLNGWEQVDIEAELAT 181

Query: 182 EFHVECFVGNDVRGIALAEHYFGASQDCQDSILVSVHRGTGAGIIVNGQVFLGYNRNVGE 241
              +   + ND    A+ E + G ++     I + +  G GAGI  +G ++ G+ +N GE
Sbjct: 182 ISGLPVTLENDATVAAIGERFHGTARHLNSFIYLYIGTGLGAGIFTDGHIYTGHAQNAGE 241

Query: 242 IGHIQIDPLGEQCQCGNFGCLE 263
           IGHI ++P G  C CGN GCLE
Sbjct: 242 IGHIVVEPGGRDCYCGNQGCLE 263