Pairwise Alignments

Query, 404 a.a., N-acetylglucosamine repressor from Vibrio cholerae E7946 ATCC 55056

Subject, 406 a.a., DNA-binding transcriptional dual regulator NagC from Klebsiella michiganensis M5al

 Score =  482 bits (1240), Expect = e-141
 Identities = 242/399 (60%), Positives = 303/399 (75%), Gaps = 1/399 (0%)

Query: 5   QIGNVDLVKQLNSAAVYRLIDQQGPISRIQVADVSQLAPASVTKITRQLLERGLIKEVAQ 64
           QIGNVDLVKQLNSAAVYRLIDQ GPISRIQ+A+ SQLAPASVTKITRQL+ERGLIKEV Q
Sbjct: 8   QIGNVDLVKQLNSAAVYRLIDQHGPISRIQIAEQSQLAPASVTKITRQLIERGLIKEVDQ 67

Query: 65  QASTGGRRAISLTTEVKPFHSIAVRIGRDYIQLSLYDLGGNSLVDEHHEFHYNTQDVLMS 124
           QASTGGRRAIS+  E + FH+I VR+GR    L+LYDL   +L +EH+     TQ+ L  
Sbjct: 68  QASTGGRRAISIVAETRSFHAIGVRLGRYDATLTLYDLSSKTLEEEHYPLPERTQETLEH 127

Query: 125 SLIKQIKQFIQQHTALIDQLIAIGVALPGLVNPETGVVEYMPNVAINELPLGATIRDEFH 184
           +L+  I  F++     I +LIAI V LPGLV+PE+GV+ YMP++ +    L   +   F 
Sbjct: 128 ALLNIIAAFMESCQRKIRELIAISVILPGLVDPESGVIRYMPHIQVENWGLVEALEKRFK 187

Query: 185 VECFVGNDVRGIALAEHYFGASQDCQDSILVSVHRGTGAGIIVNGQVFLGYNRNVGEIGH 244
           V C+VG+D+R +ALAEHYFGAS DC+DSILV VHRGTGAGII NG++F+G N NVGEIGH
Sbjct: 188 VTCYVGHDIRSLALAEHYFGASHDCEDSILVRVHRGTGAGIISNGRIFIGRNGNVGEIGH 247

Query: 245 IQIDPLGEQCQCGNFGCLETVATNPAITSRVQKLIAQGYESSLSTLDTITIDDVCEHANA 304
           IQ+DPLGE+C CGNFGCLETVA N AI  RV+ L+ QGY+S +S LD  TI  +C+ AN 
Sbjct: 248 IQVDPLGERCHCGNFGCLETVAANAAIEHRVRHLLEQGYQSKIS-LDDCTIKTICKAANK 306

Query: 305 GDELAKQALVRVGNQLGKAIAITVNLFNPQKIVIAGQITAAKEIVFPAIQRNVENQSLKT 364
           GD LA + +  VG  LGK IAI +NLFNPQK+VIAG+I  A++++ PAI+  +  Q+LK 
Sbjct: 307 GDALACEVIEHVGRHLGKTIAIAINLFNPQKVVIAGEIVEAEKVLLPAIEACINTQALKA 366

Query: 365 FHQHLPIVSSQVYKQPTMGAFAMIKRAMLNGVLLQKLLE 403
           F ++LP+V S +  +  +GAFA++KRAMLNG LLQ+LLE
Sbjct: 367 FRKNLPVVRSTLDHRSAIGAFALVKRAMLNGTLLQRLLE 405