Pairwise Alignments

Query, 404 a.a., N-acetylglucosamine repressor from Vibrio cholerae E7946 ATCC 55056

Subject, 414 a.a., ROK family protein (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  146 bits (369), Expect = 1e-39
 Identities = 95/326 (29%), Positives = 160/326 (49%), Gaps = 6/326 (1%)

Query: 19  AVYRLIDQQGPISRIQVADVSQLAPASVTKITRQLLERGLIKEVAQQA-STG-GRRAISL 76
           AV+  +   G   R+ +A    ++P SVT +T  L+E G + E+A  A  TG GR  ++L
Sbjct: 30  AVFEHVRAAGHAPRMDIARALGISPGSVTTLTSDLIEAGFLTEIAAPARETGRGRPPVAL 89

Query: 77  TTEVKPFHSIAVRIGRDYIQLSLYDLGGNSLVDEHHEFHYNTQDV--LMSSLIKQIKQFI 134
                  + + +R+  +   +SL D  G  L   H         V  L++ +   I + +
Sbjct: 90  AVVPAARYVLGLRLSDEMHTVSLSDFSGTELATAHRASQPGRYAVEALLTEMATLIDEVL 149

Query: 135 QQHTALIDQLIAIGVALPGLVNPETGVVEYMPNVAINELPLGATIRDEFHVECFVGNDVR 194
                  D++ A+GV LPG V+ ETG V + P +A  +  L A I D F +   + ND  
Sbjct: 150 AAAALPRDRVAALGVGLPGAVHHETGRVAWSPILAGQDHALQAIIEDRFGLPAHLENDAN 209

Query: 195 GIALAEHYFGASQDCQDSILVSVHRGTGAGIIVNGQVFLGYNRNVGEIGHIQIDPLGEQC 254
            + LAE +FGA +  QD  +V++ +G G G+++N ++F G      E+GH ++   G  C
Sbjct: 210 VLTLAELWFGAGRAMQDFAVVTIEQGVGMGLVLNNRLFRGAQGLGLELGHTKVQLDGALC 269

Query: 255 QCGNFGCLETVATNPAITSRVQKLIAQGYESSLSTLDTITIDDVCEHANAGDELAKQALV 314
           +CG  GCLE    + A+       + +   S+ +      ++ + + A AG+  AK    
Sbjct: 270 RCGQRGCLEAYLADYALVREASTALDRDPRSAQTA--AAMLESLFDQAKAGNGAAKAIFQ 327

Query: 315 RVGNQLGKAIAITVNLFNPQKIVIAG 340
           R G  L   +A  V LF+P+ I+++G
Sbjct: 328 RAGRFLSLGLANVVQLFDPELIILSG 353