Pairwise Alignments

Query, 404 a.a., N-acetylglucosamine repressor from Vibrio cholerae E7946 ATCC 55056

Subject, 326 a.a., ROK family transcriptional repressor, with glucokinase domain (NCBI ptt file) from Bacteroides thetaiotaomicron VPI-5482

 Score =  123 bits (309), Expect = 7e-33
 Identities = 70/240 (29%), Positives = 127/240 (52%), Gaps = 5/240 (2%)

Query: 141 IDQLIAIGVALPGLVNPETGVVEYMPNVAINE-LPLGATIRDEFHVECFVGNDVRGIALA 199
           +D++  IGV  P   N  TG +E+ PN+     LPL A   +   +   + ND    A+ 
Sbjct: 66  VDKIRGIGVGAPN-GNYYTGTIEFAPNLPWKGILPLAAMFEERLGIPTALTNDANAAAIG 124

Query: 200 EHYFGASQDCQDSILVSVHRGTGAGIIVNGQVFLGYNRNVGEIGHIQIDPLGEQCQCGNF 259
           E  +GA++  +D I++++  G G+GI++NGQ+  G++   GE+GH+     G  C CG  
Sbjct: 125 EMTYGAARGMKDFIMITLGTGVGSGIVINGQMVYGHDGFAGELGHVIARRDGRVCGCGRK 184

Query: 260 GCLETVATNPAITSRVQKLIAQGYESSL---STLDTITIDDVCEHANAGDELAKQALVRV 316
           GCLET  +   +    ++ +A   ++SL      + IT  DV + A  GD+LA++     
Sbjct: 185 GCLETYCSATGVARTAREFLAARTDASLLRNIPAENITSKDVYDAAVQGDKLAQEIFEFT 244

Query: 317 GNQLGKAIAITVNLFNPQKIVIAGQITAAKEIVFPAIQRNVENQSLKTFHQHLPIVSSQV 376
           GN LG+A+A  +   +P+ IV+ G +  + + +   IQ+ +++  L  +     ++ S++
Sbjct: 245 GNILGEALADAIAFSSPEAIVLFGGLAKSGDYIMKPIQKAIDDNILNIYKGKTKLLVSEL 304