Pairwise Alignments

Query, 528 a.a., cation:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 562 a.a., Kef-type K+ transport system, predicted NAD-binding component from Pseudomonas stutzeri RCH2

 Score =  160 bits (406), Expect = 9e-44
 Identities = 139/553 (25%), Positives = 255/553 (46%), Gaps = 54/553 (9%)

Query: 4   ILLSAAFLAGFIALKCHLPPLVGFLIAGFALNAYGF---TSNDTLSLLADLGVTLLLFTI 60
           +LL  + + G IA+    P L+ +++ G  L    F    + + + LLA++GV +LLF +
Sbjct: 15  MLLIISAVVGAIAVSLRQPLLISYIVVGILLGPALFGPVNAAEQIHLLAEIGVAVLLFVV 74

Query: 61  GLKLEVKTLLAKEIWAGSTIHNL----LSTALFTLLLLIFKQLGLDSLADLSFDKLILIG 116
           GLKL++           + I N+    L+T L  L   I     L  L   S  + + I 
Sbjct: 75  GLKLDL-----------AHIRNIGPVALATGLGQLTFTIIFGFALTLLMGKSAMEALYIA 123

Query: 117 FALSFSSTVFAVKSLQEKGEMNATYGTLAIGILVMQD---IFAVVFLTASTGKLPEWYA- 172
            AL+FSST+  VK L +K E+++ +G +A+G L++QD   + A++ ++A  G     +A 
Sbjct: 124 VALTFSSTIIIVKLLSDKHELDSLHGRIAVGFLIVQDLAVVLAMMTMSALRGAGDAGWAE 183

Query: 173 -----------IGLFVLPLLRPLFYELLDWVGHGEMLVLFGIFFALVVGAGSFQL---VG 218
                        + +  L+R +  +L+  +   + L+L    FA+  G G   L   VG
Sbjct: 184 VSGSLLIRLAGAAIVMYVLMRYILPKLVSRMARSQELLL---IFAIAWGTGLAALGDYVG 240

Query: 219 MKPDLGALILGMMLASHHKASELSKALFNLKELFLVCFFLNIGLSAHPTTTG------IM 272
              + GA + G  LAS      ++  L  +++  L+ FF+++G     +T G      ++
Sbjct: 241 FSKEAGAFVAGFSLASTAYREAMNARLTGIRDFMLLFFFIDLGGRLDFSTLGNEILPAVV 300

Query: 273 LALLLLLLLPIKGVLYFWVIHQFHFRVRTSLLASLSLFNFSEFGLIVGGLAFKMGWINSD 332
           LAL +L+  P+   +   ++    +R RT  LA L++   SEF ++   +   +G +   
Sbjct: 301 LALFVLIGNPL---IVMAIMGYMGYRKRTGFLAGLTVAQISEFSIVFVAMGITLGHVGPQ 357

Query: 333 ILVALAVSVPLSFILAAPIERKGHAIYQRSAKWL----KEQAAESLHTRDRLIDPGEAQV 388
            L    +   ++ +L+  +      +Y+R A WL    +++    L         G  ++
Sbjct: 358 ALGLTTLVGLVTIMLSTYMILFSQPLYERLAPWLGVFERKRPYRELEVEALGKPQGHPRI 417

Query: 389 LILGMGRIGRGAYEELTSRHGEICLGVEIREEAANSHREEGRNVISGDATDPDFWERIFD 448
           ++ G+GR G    ++L +    + LGV+   EA  + R     V  GD  DP F E +  
Sbjct: 418 IVFGLGRYGSRLLQQLAAARMPV-LGVDFDPEAVRTLRRSKLPVRFGDGEDPSFLESL-P 475

Query: 449 TGKVKLVLLAMPHHQANQIALEQLQKRHYQGQIAAIAEYPDQIESLLEHGAHAAFNIYSE 508
               + V+ + P  +AN+  L  L+   +QG+IA +       ++L   G     N +++
Sbjct: 476 LQHAEWVVTSFPQWEANRAFLHALKHAGFQGKIAGVVRDDQHGKALDAAGVARVLNPFTD 535

Query: 509 AGTGFARHVCEQL 521
           A    AR + E+L
Sbjct: 536 AADFAARSLIEEL 548