Pairwise Alignments

Query, 528 a.a., cation:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 587 a.a., transporter, CPA2 family from Pseudomonas syringae pv. syringae B728a

 Score = 90.9 bits (224), Expect = 1e-22
 Identities = 99/410 (24%), Positives = 182/410 (44%), Gaps = 71/410 (17%)

Query: 11  LAGFIALKCHL---PPLVGFLIAGFALNAYG-----FTSNDTLSLLADLGVTLLLFTIGL 62
           +AG + +  H    P ++G+++AGF +  +          +T+ +LA+LGV  L+F +GL
Sbjct: 16  VAGVVTILFHRLRQPVVLGYIVAGFIIGPHTPPFSLIHDEETIKILAELGVIFLMFCLGL 75

Query: 63  KLEVKTLLAKEIWAGSTIHNLLSTALFTLLLLIFKQLGLDSLADLSFDKLILIGFALSFS 122
           +  ++ L   ++ A + I   L  AL   ++ I  ++G       + D L L G  L+ S
Sbjct: 76  EFSLRKLF--KVGATAFIAAFLEIAL---MIWIGYEIG-QFFGWKTMDSLFL-GAILAIS 128

Query: 123 STVFAVKSLQEKGEMNATYGTLAIGILVMQDIFAVVFLT-----------------ASTG 165
           ST   VK+L +    N  +  L  G+L+++DI  +  +                  ++ G
Sbjct: 129 STTIIVKALNDLKMKNQRFAQLIFGVLIVEDILGIGIIALLSGIAVSGSVSSGEVFSTVG 188

Query: 166 KLPEWYAIGLFVLPLLRPLFYELLDWVGHGEMLVL------FGIFFALVVGAGSFQLVGM 219
           KL  +  + L +  L+ P     +      EML++      FG  F L+V    + +V  
Sbjct: 189 KLSLFMIVALVIGILVVPRLLSYVARFESNEMLLITVLGLCFG--FCLLVVKLEYSMV-- 244

Query: 220 KPDLGALILGMMLASHHKASELSKALFNLKELFLVCFFLNIGLSAHPTTTGIML----AL 275
              LGA ++G ++A   +  ++ + +  ++++F   FF+ IGL   P   GI+L     +
Sbjct: 245 ---LGAFLIGAIMAESRELLKIERLIEPVRDMFSAIFFVAIGLLIDP---GILLQYAWPI 298

Query: 276 LLLLLLPIKGVLYFWVIHQF--HFRVRTSLLASLSLFNFSEFGLIVGGLAFKMGWINSDI 333
            ++ +  + G +    +  F      RTSL   + L    EF  I+  L   +  + SD 
Sbjct: 299 AVITVAVVLGKMLSCGLGAFIAGNDGRTSLRVGMGLSQIGEFSFIIAALGMTL-QVTSDF 357

Query: 334 LVALAVSV----------------PLSFILAAPIERKGHAIYQRSAKWLK 367
           L  +AV+V                PLS  LAA + R+   ++    +WL+
Sbjct: 358 LYPVAVAVSAITTLLTPYLIRGADPLSLKLAAIMPRRVARVFGMYGEWLR 407