Pairwise Alignments

Query, 528 a.a., cation:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 542 a.a., sodium/hydrogen exchanger (RefSeq) from Shewanella loihica PV-4

 Score =  516 bits (1330), Expect = e-151
 Identities = 262/524 (50%), Positives = 363/524 (69%), Gaps = 2/524 (0%)

Query: 1   MDLILLSAAFLAGFIALKCHLPPLVGFLIAGFALNAYGF--TSNDTLSLLADLGVTLLLF 58
           M+  +L      G +  +  LPPL+G+L+AGF L  +G   +S   L  LA+LGVTLLLF
Sbjct: 1   MEPAILIITLACGMLVSRIGLPPLIGYLVAGFVLFLFGIDESSLPLLEQLAELGVTLLLF 60

Query: 59  TIGLKLEVKTLLAKEIWAGSTIHNLLSTALFTLLLLIFKQLGLDSLADLSFDKLILIGFA 118
            IGLKL++++L   E+WAGS++H + S      LL +   LGL+ L+ L+F++L L+ FA
Sbjct: 61  AIGLKLDIRSLFKAEVWAGSSLHLMGSIIFLVPLLKLLGLLGLEQLSGLAFNQLTLLAFA 120

Query: 119 LSFSSTVFAVKSLQEKGEMNATYGTLAIGILVMQDIFAVVFLTASTGKLPEWYAIGLFVL 178
           LSFSST+FAVK L++KG+M + YG +AIGIL+MQDIFAV FLT S G +P  +A+GL +L
Sbjct: 121 LSFSSTIFAVKVLEDKGDMQSLYGRVAIGILIMQDIFAVAFLTISKGDIPSIWALGLLLL 180

Query: 179 PLLRPLFYELLDWVGHGEMLVLFGIFFALVVGAGSFQLVGMKPDLGALILGMMLASHHKA 238
           P  +PL Y+  D VGHGE+LVLFG+  ALVVGAG F+LVG+KPDLGALI+G++LA H K+
Sbjct: 181 PFAKPLIYKAFDKVGHGELLVLFGLVMALVVGAGLFELVGLKPDLGALIIGILLAGHAKS 240

Query: 239 SELSKALFNLKELFLVCFFLNIGLSAHPTTTGIMLALLLLLLLPIKGVLYFWVIHQFHFR 298
           SEL+K+LF  KELFLV FFL +GL+  P+   I LA LL+L++P+K VL+ +++  F  R
Sbjct: 241 SELAKSLFYFKELFLVAFFLTVGLNGLPSFADIGLAALLVLIVPVKIVLFLYLLTHFRLR 300

Query: 299 VRTSLLASLSLFNFSEFGLIVGGLAFKMGWINSDILVALAVSVPLSFILAAPIERKGHAI 358
            RTSL+ S +L N+SEFGLIV  +A   GW+    LV LAV++ LSF+ AAP+      +
Sbjct: 301 SRTSLMTSFNLGNYSEFGLIVAAVATSKGWLPGQWLVILAVALSLSFLFAAPLNAASARL 360

Query: 359 YQRSAKWLKEQAAESLHTRDRLIDPGEAQVLILGMGRIGRGAYEELTSRHGEICLGVEIR 418
           YQ+    L++     LH  DR I  G  + LILGMGRIG GAY+EL ++     LG+E +
Sbjct: 361 YQKFQSRLQKLERHPLHPEDRQIPVGNPRFLILGMGRIGSGAYDELANQFDGEILGIEHK 420

Query: 419 EEAANSHREEGRNVISGDATDPDFWERIFDTGKVKLVLLAMPHHQANQIALEQLQKRHYQ 478
           ++  + HR++GRNV+ GDA+D DFWE++     ++LVLLAMPHH  NQ A+EQL++  YQ
Sbjct: 421 QDLVDFHRQQGRNVVQGDASDTDFWEKLDRAPNLELVLLAMPHHAGNQFAVEQLKRLDYQ 480

Query: 479 GQIAAIAEYPDQIESLLEHGAHAAFNIYSEAGTGFARHVCEQLK 522
           G+++AI +Y +  +SL   G H+ FN+Y  AG GF  HV  +LK
Sbjct: 481 GKLSAIVQYSEDAQSLKAAGVHSVFNLYEAAGAGFVEHVVCELK 524