Pairwise Alignments

Query, 528 a.a., cation:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 589 a.a., glutathione-regulated potassium-efflux system protein (NCBI ptt file) from Shewanella oneidensis MR-1

 Score =  101 bits (252), Expect = 7e-26
 Identities = 136/509 (26%), Positives = 227/509 (44%), Gaps = 67/509 (13%)

Query: 3   LILLSAAFLAGFIALKCHLPPLVGFLIAGFALNAYGFTS-NDTLSLL--ADLGVTLLLFT 59
           L+ L AA +   +  +    P++ +L AG  L   G    +D  ++L  A+LGV L+LF 
Sbjct: 11  LLFLLAAVIFVPLGKRFGAGPILSYLAAGVILGPGGMALVSDPAAVLHFAELGVVLMLFV 70

Query: 60  IGLKLEVKTLLAKEIWAGSTIHNLLSTALFTL----LLLIFKQLGLDSLA---DLSFDKL 112
           +GL+L        ++W        L +A+F L    LLL +  +G   LA    LS +  
Sbjct: 71  LGLELN-----PSKLWE-------LRSAIFGLGSGQLLLSWAAIG--GLAWGFGLSIEAA 116

Query: 113 ILIGFALSFSSTVFAVKSLQEKGEMNATYGTLAIGILVMQDIFAVVFLTASTGKLPE--- 169
           +++G ALS SST FAV+ + E   +    G  A G+L+MQD+  +  L  +    P    
Sbjct: 117 LVVGAALSLSSTAFAVQLMSEHRLLTTPLGRDAFGVLLMQDLAVIPMLLLTAYLAPNSAQ 176

Query: 170 -------WY----AIGLFVL--PLLRPLFYELLDWVGHGEMLVLFGIFFALVVGAGSFQL 216
                  WY    A+  FVL    L P   +L+   G  E+L      FAL++  GS QL
Sbjct: 177 IEHHAVPWYWTCVALIGFVLVGKYLLPRVLKLVASSGVREVLTA----FALLLVMGSAQL 232

Query: 217 ---VGMKPDLGALILGMMLASHHKASELSKALFNLKELFLVCFFLNIGLSAHP---TTTG 270
              +G+   +GA + G+MLA+     +L   +   K L L  FF+ +G+S       T  
Sbjct: 233 MEWLGLSAGMGAFLAGIMLANSSYRHQLETDIEPFKGLLLGLFFMAVGMSMDLKLFLTDP 292

Query: 271 IMLALLLLLLLPIKGVLYFWVIHQFHFRVRTSLLASLSLFNFSEFGLIVGGLAFKMGWIN 330
           +++  +LL +L IK ++   +    H   R S+   L L    EF  ++   A     ++
Sbjct: 293 LLILAILLGMLLIKTLVLMLLGRVRHHTWRPSIALGLILAEGGEFAFVLLSQAQLSSIVD 352

Query: 331 SDILVALAVSVPLSFILAAPIERKGHAIYQRSAKWLKEQAAESLHTRDRLIDPGEAQVLI 390
             I   L +++ LS  +   I     A      K +  +  ++++         E++V+I
Sbjct: 353 DKIAQILVLAIGLSMAVTPMIFTLFRA---TKPKVVDTRLPDTINVT-------ESEVVI 402

Query: 391 LGMGRIGRGAYEELTSRHGEICLGVEIREEAANSHREEGRNVISGDATDPDFWERIFDTG 450
            G GR+G+     L S  G   + ++      +  R+ G  V  GDA   D    +   G
Sbjct: 403 AGFGRVGQITGRILAS-SGIPFVALDKDASHVDVIRQYGGEVYFGDARRLDM---LMSAG 458

Query: 451 --KVKLVLLAMPHHQANQIALEQLQKRHY 477
             + +L+LLA+   + + I + Q  K H+
Sbjct: 459 IARSRLLLLAVDSVE-DSIEIAQQVKTHF 486