Pairwise Alignments

Query, 528 a.a., cation:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 575 a.a., sodium/hydrogen exchanger (RefSeq) from Dinoroseobacter shibae DFL-12

 Score =  159 bits (402), Expect = 3e-43
 Identities = 155/561 (27%), Positives = 259/561 (46%), Gaps = 61/561 (10%)

Query: 5   LLSAAFLAGFIALKCHLPPLVGFLIAGFALNAYGFT---SNDTLSLLADLGVTLLLFTIG 61
           LL  A   GF+ L    P +V F+  G            S++ + LLA+LG+ LLLF +G
Sbjct: 16  LLVLAAGVGFLGLLMRQPLIVSFIAVGILAGPSLLDVAQSDEQIDLLAELGIALLLFLVG 75

Query: 62  LKLE---VKTLLAKEIWAGSTIHNLLSTALFTLLLLIFKQLGLDSLADLSFDKLILIGFA 118
           LKL+   V+TL    +  G  +  ++ T +F  L+ +   LGLD+L        I +  A
Sbjct: 76  LKLDFNLVRTLGPVALVTG--LGQVIFTTVFGFLIAL--ALGLDALT------AIYVAIA 125

Query: 119 LSFSSTVFAVKSLQEKGEMNATYGTLAIGILVMQDIFAVVFLTAST-----GKLPE---- 169
           L+FSST+  VK L +K E++A +G +A+G L++QDI  VV + A +     G   E    
Sbjct: 126 LTFSSTIIIVKLLSDKREIDALHGRIALGFLIVQDIVVVVAMIALSAIGVGGAAAEGENA 185

Query: 170 --------WYAIGL--FVLPLLRPLFYELLDWVGHG-EMLVLFGIFFALVVGAGSFQLVG 218
                    Y IG+  FV+  +R +   L++ +    E+LV F I +A ++ A    L G
Sbjct: 186 LAEVLRVLGYGIGMLAFVVIFIRYVATPLVERLSRAPELLVSFAIGWAALLAAVGHYL-G 244

Query: 219 MKPDLGALILGMMLASHHKASELSKALFNLKELFLVCFFLNIGLSAHPTTTG------IM 272
              +LG L+ G+ LAS      ++  L +L++  L+ FF+ +G S   +  G      I+
Sbjct: 245 FGKELGGLLAGVSLASTPFREAIAARLASLRDFLLLFFFIALGASLDLSVLGASIGPAIV 304

Query: 273 LALLLLLLLPIKGVLYFWVIHQFHFRVRTSLLASLSLFNFSEFGLIVGGLAFKMGWINSD 332
           L+L +L+  P+   +   ++    +R RT  LA L++   SEF LI   +   +G +  D
Sbjct: 305 LSLFVLIGNPL---IVLAIMGAMGYRKRTGFLAGLTVAQISEFSLIFMAMGVAIGHVAED 361

Query: 333 ILVALAVSVPLSFILAAPIERKGHAIYQRSAKWLKEQAAESLHTR-DRLIDPGEAQ---V 388
            L  + +   ++   +  +    H +Y      L     E  H + +  + PG A+   V
Sbjct: 362 ALGLVTLVGLVTIAASTYMITYSHQLYGLFEPVL--GVFERRHPKAEDGVGPGTARAHDV 419

Query: 389 LILGMGRIGRGAYEELTSRHGEICLGVEIREEAANSHREEGRNVISGDATDPDFWERIFD 448
           ++ G+GR G G    L    G   LGV+   EA    R +G +V+ GDATDP+F   +  
Sbjct: 420 ILFGLGRYGLGIASALRD-SGRSILGVDFSPEAVRHARAQGFDVLFGDATDPEFLGHL-P 477

Query: 449 TGKVKLVLLAMPHHQA-------NQIALEQLQKRHYQGQIAAIAEYPDQIESLLEHGAHA 501
             + + +++A+P H             L  ++   + G+IA  A        L    A  
Sbjct: 478 LARAEWLVMAVPEHDTGLTHDDPRHALLRAVRDLGFDGKIAVAAHRDTTAMMLQAERADL 537

Query: 502 AFNIYSEAGTGFARHVCEQLK 522
               Y +A    A+ + +  +
Sbjct: 538 VLMPYRDAAYAAAKMITDDAR 558