Pairwise Alignments

Query, 528 a.a., cation:proton antiporter from Vibrio cholerae E7946 ATCC 55056

Subject, 589 a.a., potassium efflux system protein (RefSeq) from Shewanella sp. ANA-3

 Score =  102 bits (254), Expect = 4e-26
 Identities = 133/507 (26%), Positives = 227/507 (44%), Gaps = 63/507 (12%)

Query: 3   LILLSAAFLAGFIALKCHLPPLVGFLIAGFALNAYGFTS-NDTLSLL--ADLGVTLLLFT 59
           L+ L AA +   +  +    P++ +L AG  L   G    +D  ++L  A+LGV L+LF 
Sbjct: 11  LLFLLAAVIFVPLGKRFGAGPILSYLAAGVILGPGGMALVSDPAAVLHFAELGVVLMLFV 70

Query: 60  IGLKLEVKTLLAKEIWAGSTIHNLLSTALFTL----LLLIFKQLGLDSLA---DLSFDKL 112
           +GL+L        ++W        L +A+F L    LLL +  +G   LA    LS +  
Sbjct: 71  LGLELN-----PSKLWE-------LRSAIFGLGSGQLLLSWAAIG--GLAWGFGLSIEAA 116

Query: 113 ILIGFALSFSSTVFAVKSLQEKGEMNATYGTLAIGILVMQDIFAVVFLTASTGKLPE--- 169
           +++G ALS SST FAV+ + E   +    G  A G+L+MQD+  +  L  +    P    
Sbjct: 117 LVVGAALSLSSTAFAVQLMSEHRLLTTPLGRDAFGVLLMQDLAVIPMLLLTAYLAPNSAQ 176

Query: 170 -------WY----AIGLFVL--PLLRPLFYELLDWVGHGEMLVLFGIFFALVVGAGS-FQ 215
                  WY    A+  FVL    L P   +L+   G  E+L  F +   LV+G+    +
Sbjct: 177 IEHHAVPWYWTSVALVGFVLVGKYLLPRLLKLVASSGVREVLTAFALL--LVMGSAELME 234

Query: 216 LVGMKPDLGALILGMMLASHHKASELSKALFNLKELFLVCFFLNIGLSAHP---TTTGIM 272
            +G+   +GA + G+MLA+     +L   +   K L L  FF+ +G+S       T  ++
Sbjct: 235 WLGLSAGMGAFLAGIMLANSSYRHQLETDIEPFKGLLLGLFFMAVGMSMDLKLFLTDPLL 294

Query: 273 LALLLLLLLPIKGVLYFWVIHQFHFRVRTSLLASLSLFNFSEFGLIVGGLAFKMGWINSD 332
           +  +LL +L IK ++   +    H   R S+   L L    EF  ++   A     ++  
Sbjct: 295 ILAILLGMLLIKTLVLMLLGRLRHHAWRPSIALGLILAEGGEFAFVLLSQAQLSSIVDDK 354

Query: 333 ILVALAVSVPLSFILAAPIERKGHAIYQRSAKWLKEQAAESLHTRDRLIDPGEAQVLILG 392
           I   L +++ LS  +   I     A      K +  +  ++++         E++V+I G
Sbjct: 355 IAQILVLAIGLSMAVTPMIFTLFRA---TKPKVVDTRLPDTINVT-------ESEVVIAG 404

Query: 393 MGRIGRGAYEELTSRHGEICLGVEIREEAANSHREEGRNVISGDATDPDFWERIFDTG-- 450
            GR+G+     L S  G   + ++      +  R+ G  V  GDA   D    +   G  
Sbjct: 405 FGRVGQITGRILAS-SGIPFVALDKDASHVDVIRKYGGEVYFGDARRLDM---LMSAGIA 460

Query: 451 KVKLVLLAMPHHQANQIALEQLQKRHY 477
           + +L+LLA+ + + + I + Q  K H+
Sbjct: 461 RSRLLLLAVDNVE-DSIEIAQQVKTHF 486