Pairwise Alignments

Query, 165 a.a., transcription/translation regulatory transformer protein RfaH from Vibrio cholerae E7946 ATCC 55056

Subject, 169 a.a., transcriptional activator RfaH from Pseudomonas stutzeri RCH2

 Score = 85.1 bits (209), Expect = 5e-22
 Identities = 50/150 (33%), Positives = 78/150 (52%), Gaps = 2/150 (1%)

Query: 3   RWYLLYCKRGEQQRAKMHLENQSVECFYPEVCVEKILRGKRQMVQEPLFPSYMFVRFDFE 62
           RWYL+  K  ++ RA+ HL  Q  EC+ P                E LFP Y+F+R D  
Sbjct: 8   RWYLIQTKPRQEARAEEHLLRQHFECYRPVKASSPSRGSPIARTGEALFPGYLFIRLDCI 67

Query: 63  NGPSFTTVRSTRGVVDFVRLGPHPRELQGDLIYQLKQLDCEQLKHATKQLPEKGQTVRVA 122
           +  ++  +RSTRGV   V  G  P  ++ +LI QL+Q   +     T      G  V V+
Sbjct: 68  HD-NWYPIRSTRGVSRVVSFGGQPTPVRDELIAQLRQRLAQSESGRTATF-NPGDRVHVS 125

Query: 123 RGQFAGIEAIYLEPDGDTRSIMLVKMISQQ 152
            G F+ IEAI++  DG+ RS++L+ ++ ++
Sbjct: 126 GGSFSEIEAIFVSSDGEERSVILLNLLQRE 155