Pairwise Alignments

Query, 165 a.a., transcription/translation regulatory transformer protein RfaH from Vibrio cholerae E7946 ATCC 55056

Subject, 170 a.a., Transcriptional activator RfaH from Pseudomonas syringae pv. syringae B728a

 Score = 88.6 bits (218), Expect = 5e-23
 Identities = 51/150 (34%), Positives = 79/150 (52%), Gaps = 5/150 (3%)

Query: 3   RWYLLYCKRGEQQRAKMHLENQSVECFYPEVCVEKILRGKRQMVQEPLFPSYMFVRFDFE 62
           RWYL+  K  ++ RA+ HL  Q  EC+ P +  +    G R    EPLFP Y+F+  D +
Sbjct: 9   RWYLIQTKPRQEARAEEHLRRQQFECYRP-LQADAKKTGTRVQAGEPLFPGYLFIHMD-Q 66

Query: 63  NGPSFTTVRSTRGVVDFVRLGPHPRELQGDLIYQLKQLDCEQLKHATKQLPEKGQTVRVA 122
              ++  +RSTRGV   V  G HP  ++  LI Q++Q        A K    +G  V + 
Sbjct: 67  VQDNWYPIRSTRGVSRIVTFGGHPVPVRDHLIEQIRQ---RLATPAPKTQFAQGDAVLIT 123

Query: 123 RGQFAGIEAIYLEPDGDTRSIMLVKMISQQ 152
              +  +EAI+L  DG  R+++L+ M+ +Q
Sbjct: 124 HASWGDVEAIFLSKDGTQRAVILLNMLQRQ 153