Pairwise Alignments

Query, 165 a.a., transcription/translation regulatory transformer protein RfaH from Vibrio cholerae E7946 ATCC 55056

Subject, 167 a.a., transcriptional activator rfaH, putative (RefSeq) from Shewanella amazonensis SB2B

 Score = 90.1 bits (222), Expect = 2e-23
 Identities = 57/164 (34%), Positives = 89/164 (54%), Gaps = 8/164 (4%)

Query: 1   MKRWYLLYCKRGEQQRAKMHLENQSVECFYPEVCVEKILRGKRQMVQEP-LFPSYMFVRF 59
           MK WYL+YCK   + RA+ +L  Q++E + P+   +    G    V E  LFP+Y+FV+F
Sbjct: 1   MKAWYLIYCKPRNEMRAQQNLSMQNLETYLPKHRKQVKASGGAVSVSESVLFPNYLFVQF 60

Query: 60  DFENGPSFTTVRS---TRGVVDFVRLGPHPRELQGDLIYQLKQLDCEQLKHATKQLPEKG 116
           D    P  T+VRS   TRGV   V        +   LI  LK+ + +  K A ++    G
Sbjct: 61  D----PEVTSVRSIHATRGVSRIVGCSEQMTPIDDALIRALKRKELQVEKLACEKPLAAG 116

Query: 117 QTVRVARGQFAGIEAIYLEPDGDTRSIMLVKMISQQVPMSIENT 160
           + V+   G F+ +EAI+LE DG+ R  +L + + QQ  + +E++
Sbjct: 117 ERVKFCAGPFSDLEAIFLESDGNKRCQVLFEFMGQQKQLDVESS 160