Pairwise Alignments

Query, 165 a.a., transcription/translation regulatory transformer protein RfaH from Vibrio cholerae E7946 ATCC 55056

Subject, 238 a.a., Probable transcription antitermination protein NusG from Mycobacterium tuberculosis H37Rv

 Score = 45.8 bits (107), Expect = 5e-10
 Identities = 40/153 (26%), Positives = 69/153 (45%), Gaps = 19/153 (12%)

Query: 4   WYLLYCKRGEQQRAKMHLEN--QSVEC----FYPEVCVEKILR---GKRQMVQEPLFPSY 54
           WY+++   G + + K +LE   Q+++     F  EV  E++     G+R+ V   + P Y
Sbjct: 49  WYVVHSYAGYENKVKANLETRVQNLDVGDYIFQVEVPTEEVTEIKNGQRKQVNRKVLPGY 108

Query: 55  MFVRFDFENGPSFTTVRSTRGVVDFVRLGPHPRELQGDLIYQLKQLDCEQLKHATKQLPE 114
           + VR D  +  S+  VR+T GV  FV     P  L  D + +        L   + +   
Sbjct: 109 ILVRMDLTD-DSWAAVRNTPGVTGFVGATSRPSALALDDVVKF------LLPRGSTRKAA 161

Query: 115 KGQTVRVARGQFAGIEAIYLEPD---GDTRSIM 144
           KG     A  +  G+E   +E D   G++ ++M
Sbjct: 162 KGAASTAAAAEAGGLERPVVEVDYEVGESVTVM 194